BMRB Entry 4390

Name: Backbone dynamics of the human CC-chemokine eotaxin
Published: 2011-08-10

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4390

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone dynamics of the human CC-chemokine eotaxin

Deposition date:

1999-09-08

Original release date:

2011-08-10

Authors:

Ye, Jiqing; Mayer, Kristen; Stone, Martin

Citation:

Citation: Ye, Jiqing; Mayer, Kristen; Stone, Martin. "Backbone dynamics of the human CC-chemokine eotaxin" J. Biomol. NMR 15, 115-124 (1999).
PubMed: 10605085

Assembly members:

Assembly members:
CC-chemokine eotaxin, polymer, 74 residues, 8347 Da.

Natural source:

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CC-chemokine eotaxin: GPASVPTTCCFNLANRKIPL QRLESYRRITSGKCPQKAVI FKTKLAKDICADPKKKWVQD SMKYLDQKSPTPKP

Data sets:

heteronucl_NOEs
- heteronuclear_NOE_eotaxin
heteronucl_T1_relaxation
- T1_relaxation_eotaxin
heteronucl_T2_relaxation
- T2_relaxation_eotaxin
order_parameters
- S2_parameters

Data type	Count
order parameters	57
T1 relaxation values	57
T2 relaxation values	57

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	eotaxin	1

Entities:

Entity 1, eotaxin 74 residues - 8347 Da.

1

GLY

PRO

ALA

SER

VAL

PRO

THR

CYS

2

PHE

ASN

LEU

ALA

ASN

ARG

LYS

ILE

PRO

LEU

3

GLN

ARG

LEU

GLU

SER

TYR

ARG

ILE

THR

4

SER

GLY

LYS

CYS

PRO

GLN

LYS

ALA

VAL

ILE

5

PHE

LYS

THR

LYS

LEU

ALA

LYS

ASP

ILE

CYS

6

ALA

ASP

PRO

LYS

TRP

VAL

GLN

ASP

7

SER

MET

LYS

TYR

LEU

ASP

GLN

LYS

SER

PRO

8

THR

PRO

LYS

PRO

Samples:

sample_one: CC-chemokine eotaxin, [U-15N], 0.8 mM

sample_conditions: pH: 5.00; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N	not available	not available	not available
1H-15N NOESY	not available	not available	not available

Software:

FELIX v95 - spectral processing

NMR spectrometers:

Varian Unity-INOVA 500 MHz

BMRB	19989 4155
PDB	1EOT 2EOT 2MPM
DBJ	BAA08370 BAG72995
EMBL	CAA99997 CAA99998 CAB07027 CAG33702
GB	AAA98957 AAC50369 AAC51297 AAH17850 ABK41951
PRF	2208449A
REF	NP_002977 XP_002827294 XP_003818054 XP_004041989 XP_004041990
SP	P51671
AlphaFold	P51671