BMRB Entry 4330

Name: A Single-Chain T Cell Receptor
Published: 2005-01-21

Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR4330

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

A Single-Chain T Cell Receptor

Deposition date:

1999-04-09

Original release date:

2005-01-21

Authors:

Hare, B.; Wyss, D.; Reinherz, E.; Wagner, G.

Citation:

Citation: Hare, B.; Wyss, D.; Osburne, M.; Kern, P.; Reinherz, E.; Wagner, G.. "Structure, Specificity and CDR Mobility of a Class II Restricted T Cell Receptor." Nat. Struct. Biol. 6, 574-581 (1999).

Assembly members:

Assembly members:
ALPHA-BETA T CELL RECEPTOR (TCR) (D10), polymer, 249 residues, 27762 Da.

Natural source:

Natural source: Common Name: mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ALPHA-BETA T CELL RECEPTOR (TCR) (D10): AVTQSPRNKVAVTGGKVTLS CNQTNNHNNMYWYRQDTGHG LRLIHYSYGAGSTEKGDIPD GYKASRPSQENFSLILELAT PSQTSVYFCASGGQGRAEQF FGPGTRLTVLGSDYKDDDDK RSGGGGSGGGGSGGSGAQQQ VRQSPQSLTVWEGETTILNC SYEDSTFDYFPWYRQFPGKS PALLIAISLVSNKKEDGRFT IFFNKREKKLSLHITDSQPG DSATYFCAATGSFNKLTFGA GTRLAVSPY

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts

Data type	Count
13C chemical shifts	107
15N chemical shifts	209
1H chemical shifts	987

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	TCR ab	1

Entities:

Entity 1, TCR ab 249 residues - 27762 Da.

1

ALA

VAL

THR

GLN

SER

PRO

ARG

ASN

LYS

VAL

2

ALA

VAL

THR

GLY

LYS

VAL

THR

LEU

SER

3

CYS

ASN

GLN

THR

ASN

HIS

ASN

MET

4

TYR

TRP

TYR

ARG

GLN

ASP

THR

GLY

HIS

GLY

5

LEU

ARG

LEU

ILE

HIS

TYR

SER

TYR

GLY

ALA

6

GLY

SER

THR

GLU

LYS

GLY

ASP

ILE

PRO

ASP

7

GLY

TYR

LYS

ALA

SER

ARG

PRO

SER

GLN

GLU

8

ASN

PHE

SER

LEU

ILE

LEU

GLU

LEU

ALA

THR

9

PRO

SER

GLN

THR

SER

VAL

TYR

PHE

CYS

ALA

10

SER

GLY

GLN

GLY

ARG

ALA

GLU

GLN

PHE

11

PHE

GLY

PRO

GLY

THR

ARG

LEU

THR

VAL

LEU

12

GLY

SER

ASP

TYR

LYS

ASP

LYS

13

ARG

SER

GLY

SER

GLY

14

GLY

SER

GLY

SER

GLY

ALA

GLN

15

VAL

ARG

GLN

SER

PRO

GLN

SER

LEU

THR

VAL

16

TRP

GLU

GLY

GLU

THR

ILE

LEU

ASN

CYS

17

SER

TYR

GLU

ASP

SER

THR

PHE

ASP

TYR

PHE

18

PRO

TRP

TYR

ARG

GLN

PHE

PRO

GLY

LYS

SER

19

PRO

ALA

LEU

ILE

ALA

ILE

SER

LEU

VAL

20

SER

ASN

LYS

GLU

ASP

GLY

ARG

PHE

THR

21

ILE

PHE

ASN

LYS

ARG

GLU

LYS

LEU

22

SER

LEU

HIS

ILE

THR

ASP

SER

GLN

PRO

GLY

23

ASP

SER

ALA

THR

TYR

PHE

CYS

ALA

THR

24

GLY

SER

PHE

ASN

LYS

LEU

THR

PHE

GLY

ALA

25

GLY

THR

ARG

LEU

ALA

VAL

SER

PRO

TYR

Samples:

sample_one: ALPHA-BETA T CELL RECEPTOR (TCR) (D10) 1.0 mM; sodium acetate 20 mM

sample_two: ALPHA-BETA T CELL RECEPTOR (TCR) (D10), [U-50% 2H], 1.0 mM; sodium acetate 20 mM

sample_conditions: ionic strength: 20 mM; pH: 5.0 na; pressure: 1.0 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	not available	not available	sample_conditions

Software:

No software information available

NMR spectrometers:

Varian UnityPlus 500 MHz
Varian UnityPlus 750 MHz