BMRB Entry 4316

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4316

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N Chemical Shift Assignements for Subunit c of the ATP Synthase from Propionigenium modestum

Deposition date:

1999-03-11

Original release date:

1999-05-27

Authors:

Matthey, Ulrich; Kaim, Georg; Braun, Daniel; Wuthrich, Kurt; Dimroth, Peter

Citation:

Citation: Matthey, Ulrich; Kaim, Georg; Braun, Daniel; Wuthrich, Kurt; Dimroth, Peter. "NMR Studies of Subunit C of the ATP Synthase from Propionigenium modestum in Dodecylsulfate Micelles" Eur. J. Biochem. 261, 459-467 (1999).

Assembly members:

Assembly members:
ATP synthase subunit c, polymer, 89 residues, 8731 Da.

Natural source:

Natural source: Common Name: P. modestum Taxonomy ID: 2333 Superkingdom: Eubacteria Kingdom: not available Genus/species: Propionigenium modestum

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: plasmid

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ATP synthase subunit c: MDMVLAKTVVLAASAVGAGA AMIAGIGPGVGQGYAAGKAV ESVARQPEAKGDIISTMVLG QAIAESTGIYSLVIALILLY ANPFVGLLG

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts

Data type	Count
13C chemical shifts	269
15N chemical shifts	85
1H chemical shifts	617

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	ATP synthase subunit c	1

Entities:

Entity 1, ATP synthase subunit c 89 residues - 8731 Da.

1

MET

ASP

MET

VAL

LEU

ALA

LYS

THR

VAL

2

LEU

ALA

SER

ALA

VAL

GLY

ALA

GLY

ALA

3

ALA

MET

ILE

ALA

GLY

ILE

GLY

PRO

GLY

VAL

4

GLY

GLN

GLY

TYR

ALA

GLY

LYS

ALA

VAL

5

GLU

SER

VAL

ALA

ARG

GLN

PRO

GLU

ALA

LYS

6

GLY

ASP

ILE

SER

THR

MET

VAL

LEU

GLY

7

GLN

ALA

ILE

ALA

GLU

SER

THR

GLY

ILE

TYR

8

SER

LEU

VAL

ILE

ALA

LEU

ILE

LEU

TYR

9

ALA

ASN

PRO

PHE

VAL

GLY

LEU

GLY

Samples:

sample_one: ATP synthase subunit c, [U-15N], 1.5 mM; SDS deuterated 300 mM

sample_two: ATP synthase subunit c, [U-15N; U-13C], 1.9 mM; SDS deuterated 300 mM

Pmc_set1: ionic strength: .42 na; pH: 5.8 na; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D [15N,1H]-HSQC	not available	not available	not available
2D ct-[13C,1H]-HSQC	not available	not available	not available
3D HNCA	not available	not available	not available
3D CBCA(CO)NH	not available	not available	not available
3D 15N-res. [1H,1H]-NOESY (mixing time: 60 ms)	not available	not available	not available
3D 15N-res. [1H,1H]-TOCSY (mixing time: 60 ms)	not available	not available	not available
3D HCCH-COSY	not available	not available	not available
3D HCCH-TOCSY (mixing time: 17.2 ms)	not available	not available	not available
3D 13C-res. [1H,1H]-NOESY (mixing time: 50 ms)	not available	not available	not available
2D [1H, 1H]-TOCSY	not available	not available	not available
2D [1H, 1H]-NOESY	not available	not available	not available
3D 13C/13C-res. [1H,1H]-NOESY (mixing time: 60 ms)	not available	not available	not available
2D 15N{1H}-NOE	not available	not available	not available
The 13C/13C-res. [1H, 1H]-NOESY were recorded	not available	not available	not available
to verify some resonance assignments.	not available	not available	not available

Software:

PROSA - data processing

XEASY - spectral analyses

NMR spectrometers:

Bruker DRX 500 MHz
Bruker DRX 600 MHz
Bruker DRX 750 MHz
Varian Unity+ 750 MHz

EMBL	CAA37840 CAA37912 CAA41369 CAA46895
GB	AAB22156
SP	P21905
AlphaFold	P21905