BMRB Entry 4311

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4311

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Title:
Sequence-Specific 1H, 13C and 15N Chemical Shift Assignment and Secondary Structure of the HTLV-I Capsid Protein
Deposition date:
1999-02-25
Original release date:
1999-08-12
Authors:
Khorasanizadeh, Sepideh; Campos-Olivas, Ramon; Clark, Christine; Summers, Michael
Citation:

Citation: Khorasanizadeh, Sepideh; Campos-Olivas, Ramon; Clark, Christine; Summers, Michael. "Sequence-Specific 1H, 13C and 15N Chemical Shift Assignment and Secondary Structure of the HTLV-I Capsid Protein"  J. Biomol. NMR 14, 199-200 (1999).

Assembly members:

Assembly members:
human T-cell leukemia virus type I capsid protein, polymer, 214 residues, 24500 Da.

Natural source:

Natural source:   Common Name: HTLV-I   Taxonomy ID: 11908   Superkingdom: not available   Kingdom: not available   Genus/species: BLV-HTLV retroviruses Human T-cell lymphotropic virus type 1

Experimental source:

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):

Entity Sequences (FASTA):
human T-cell leukemia virus type I capsid protein: HHHHHSSGHIEGRHMQMKDL QAIKQEVSQAAPGSPQFMQT IRLAVQQFDPTAKDLQDLLQ YLCSSLVASLHHQQLDSLIS EAETRGITGYNPLAGPLRVQ ANNPQQQGLRREYQQLWLAA FAALPGSAKDPSWASILQGL EEPYHAFVERLNIALDNGLP EGTPKDPILRSLAYSNANKE CQKLLQARGHTNSPLGDMLR ACQTWTPKDKTKVL

Data sets:
Data typeCount
13C chemical shifts1307
15N chemical shifts403
1H chemical shifts1615

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1HTLV-I capsid monomer1

Entities:

Entity 1, HTLV-I capsid monomer 214 residues - 24500 Da.

1   HISHISHISHISHISSERSERGLYHISILE
2   GLUGLYARGHISMETGLNMETLYSASPLEU
3   GLNALAILELYSGLNGLUVALSERGLNALA
4   ALAPROGLYSERPROGLNPHEMETGLNTHR
5   ILEARGLEUALAVALGLNGLNPHEASPPRO
6   THRALALYSASPLEUGLNASPLEULEUGLN
7   TYRLEUCYSSERSERLEUVALALASERLEU
8   HISHISGLNGLNLEUASPSERLEUILESER
9   GLUALAGLUTHRARGGLYILETHRGLYTYR
10   ASNPROLEUALAGLYPROLEUARGVALGLN
11   ALAASNASNPROGLNGLNGLNGLYLEUARG
12   ARGGLUTYRGLNGLNLEUTRPLEUALAALA
13   PHEALAALALEUPROGLYSERALALYSASP
14   PROSERTRPALASERILELEUGLNGLYLEU
15   GLUGLUPROTYRHISALAPHEVALGLUARG
16   LEUASNILEALALEUASPASNGLYLEUPRO
17   GLUGLYTHRPROLYSASPPROILELEUARG
18   SERLEUALATYRSERASNALAASNLYSGLU
19   CYSGLNLYSLEULEUGLNALAARGGLYHIS
20   THRASNSERPROLEUGLYASPMETLEUARG
21   ALACYSGLNTHRTRPTHRPROLYSASPLYS
22   THRLYSVALLEU

Samples:

sample1: human T-cell leukemia virus type I capsid protein, [U-13C; U-15N], 1 mM; H2O 100%

sample2: human T-cell leukemia virus type I capsid protein, [U-13C; U-15N; U-2H], 1 mM; H2O 100%

Ex-cond_1: pH: 6.0 na; temperature: 303 K

Experiments:

NameSampleSample stateSample conditions

Software:

No software information available

NMR spectrometers:

  • Bruker DRX 800 MHz

Related Database Links:

BMRB 4649
PDB
EMBL CAA62992
GB AAB20767 AAC82581 AAD50661 AAD50663 AFM84142
REF NP_057860 NP_955618
SP P03362 P14078
AlphaFold P03362 P14078

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks