BMRB Entry 4290

Name: Sequence-specific 1H Assignment of Antimicrobial Protein Tachycitin.
Published: 2000-10-30

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4290

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Sequence-specific 1H Assignment of Antimicrobial Protein Tachycitin.

Deposition date:

1999-01-04

Original release date:

2000-10-30

Authors:

Suetake, Tetsuya; Tsuda, Sakae; Kawabata, Shun-ichiro; Kawano, Keiichi; Miura, Kazunori; Iwanaga, Sadaaki; Hikichi, Kunio; Nitta, Katsutoshi; Keiichi, Kawano

Citation:

Citation: Suetake, Tetsuya; Tsuda, Sakae; Kawabata, Shun-ichiro; Kawano, Keiichi; Miura, Kazunori; Iwanaga, Sadaaki; Hikichi, Kunio; Nitta, Katsutoshi; Keiichi, Kawano. "Chitin-binding Proteins in Invertebrates and Plants Comprise a Common Chitin-binding Structural Motif" J. Biol. Chem. 275, 17929-17932 (2000).
PubMed: 10770921

Assembly members:

Assembly members:
tachycitin, polymer, 73 residues, 8364 Da.

Natural source:

Natural source: Common Name: Japanese horseshoe crab Taxonomy ID: 6853 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Tachypleus tridentatus

Experimental source:

Experimental source: Production method: purified from the natural source

Entity Sequences (FASTA):

Entity Sequences (FASTA):
tachycitin: YLAFRCGRYSPCLDDGPNVN LYSCCSFYNCHKCLARLENC PKGLHYNAYLKVCDWPSKAG CTSVNKECHLWKT

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts

Data type	Count
1H chemical shifts	496

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	tachycitin	1

Entities:

Entity 1, tachycitin 73 residues - 8364 Da.

1

TYR

LEU

ALA

PHE

ARG

CYS

GLY

ARG

TYR

SER

2

PRO

CYS

LEU

ASP

GLY

PRO

ASN

VAL

ASN

3

LEU

TYR

SER

CYS

SER

PHE

TYR

ASN

CYS

4

HIS

LYS

CYS

LEU

ALA

ARG

LEU

GLU

ASN

CYS

5

PRO

LYS

GLY

LEU

HIS

TYR

ASN

ALA

TYR

LEU

6

LYS

VAL

CYS

ASP

TRP

PRO

SER

LYS

ALA

GLY

7

CYS

THR

SER

VAL

ASN

LYS

GLU

CYS

HIS

LEU

8

TRP

LYS

THR

Samples:

sample_one: tachycitin1.0 – 2.0 mM

sample_conditions_one: pH: 4.2; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H DQF-COSY	not available	not available	not available
2D 1H-1H TOCSY	not available	not available	not available
2D 1H-1H NOESY	not available	not available	not available

Software:

Pipp v4.0.4 - peak picking

NMR spectrometers:

JEOL Alpha 600 MHz
JEOL Alpha 500 MHz

PDB	1DQC
DBJ	BAA12864