BMRB Entry 4244

Name: NMR Solution Structure of [d(GCGAAT-3&#039;-3&#039;-alphaT-5&#039;-5&#039;-CGC)2]
Published: 2000-03-02

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PDB ID: 1bx5
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4244
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR Solution Structure of [d(GCGAAT-3'-3'-alphaT-5'-5'-CGC)2]

Deposition date:

1998-10-14

Original release date:

2000-03-02

Authors:

Aramini, J.; Mujeeb, A.; Germann, M.

Citation:

Citation: Aramini, J.; Mujeeb, A.; Germann, M.. "NMR Solution Structures of [d(GCGAAT-3'-3'-alphaT-5'-5'-CGC)2] and its Unmodified Control" Nucleic Acids Res. 26, 5644-5654 (1998).
PubMed: 9837995

Assembly members:

Assembly members:
alphaT decamer DNA, polymer, 10 residues, Formula weight is not available

Natural source:

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
alphaT decamer DNA: GCGAATXCGC

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_one

Data type	Count
1H chemical shifts	94
31P chemical shifts	9

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	alphaT strand-A	1
2	alphaT strand-B	1

Entities:

Entity 1, alphaT strand-A 10 residues - Formula weight is not available

1

DG

DC

DG

DA

DT

ATD

DC

DG

DC

Samples:

sample_one: alphaT decamer DNA 6.8 mM; NaCl 50 mM; Na phosphate 10 mM; EDTA 0.1 mM; D2O 100%

sample_two: alphaT decamer DNA 6.8 mM; NaCl 50 mM; Na phosphate 10 mM; EDTA 0.1 mM; D2O 10%; H2O 90%

sample_conditions_one: pH*: 6.5; pressure: 1 atm; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
NOESY	sample_one	not available	not available
DQF-COSY	sample_one	not available	not available

Software:

XWINNMR v1.1 - data acquisition and processing

SPARKY v3.33 - assignment and cross-peak integration

NMR spectrometers:

Bruker AMX 600 MHz