BMRB Entry 4235
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4235
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
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Citation: Aramini, James; Mujeeb, A.; Germann, Marcus. "NMR Solution Structures of [d(GCGAAT-3'-3'-alphaT-5'-5'-CGC)2]
and its Unmodified Control" Nucleic Acids Res. 15, 5644-5654 (1998).
Assembly members:
DNA decamer, polymer, 10 residues, Formula weight is not available
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
DNA decamer: GCGAATTCGC
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 82 |
| 31P chemical shifts | 9 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | strand_A | 1 |
| 2 | strand_B | 1 |
Entities:
Entity 1, strand_A 10 residues - Formula weight is not available
| 1 | DG | DC | DG | DA | DA | DT | DT | DC | DG | DC |
Samples:
sample_one: DNA decamer 2.6 mM; NaCl 50 mM; NaPhosphate 10 mM; EDTA 0.1 mM
sample_conditions_one: pH: 6.5; pressure: 1 atm; temperature: 303 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| NOESY | sample_one | not available | sample_conditions_one |
| DQF-COSY | sample_one | not available | sample_conditions_one |
| 31P-1H correlation | sample_one | not available | sample_conditions_one |
Software:
XWINNMR - acquisition, processing, assignment
SPARKY v3.33 - cross-peak integration
NMR spectrometers:
- Bruker AMX 600 MHz