BMRB Entry 4228

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PDB ID: 1bq0
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4228
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR structures (20) of the J-Domain (residues 1-77) of the Escherichia coli n-terminal fragment (residues 1-104) of the molecular chaperone DNAJ

Deposition date:

1998-08-20

Original release date:

2001-07-09

Authors:

Huang, K.; Flanagan, J.; Prestegard, J.

Citation:

Citation: Huang, K.; Flanagan, J.; Prestegard, J.. "The influence of c-terminal extension on the structure of the j-domain in e. coli dnaj"" Protein Sci. ., 5587-5596 (1998).

Assembly members:

Assembly members:
DNAJ, polymer, 103 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Escherichia coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: Proteobacteria Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: T7

Entity Sequences (FASTA):

Entity Sequences (FASTA):
DNAJ: AKQDYYEILGVSKTAEEREI RKAYKRLAMKYHPDRNQGDK EAEAKFKEIKEAYEVLTDSQ KRAAYDQYGHAAFEQGGMGG GGFGGGADFSDIFGDVFGDI FGG

Data sets:

assigned_chemical_shifts
- chem_shift_set_1

Data type	Count
13C chemical shifts	376
15N chemical shifts	92
1H chemical shifts	600

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	DNAJ	1

Entities:

Entity 1, DNAJ 103 residues - Formula weight is not available

1

ALA

LYS

GLN

ASP

TYR

GLU

ILE

LEU

GLY

2

VAL

SER

LYS

THR

ALA

GLU

ARG

GLU

ILE

3

ARG

LYS

ALA

TYR

LYS

ARG

LEU

ALA

MET

LYS

4

TYR

HIS

PRO

ASP

ARG

ASN

GLN

GLY

ASP

LYS

5

GLU

ALA

GLU

ALA

LYS

PHE

LYS

GLU

ILE

LYS

6

GLU

ALA

TYR

GLU

VAL

LEU

THR

ASP

SER

GLN

7

LYS

ARG

ALA

TYR

ASP

GLN

TYR

GLY

HIS

8

ALA

PHE

GLU

GLN

GLY

MET

GLY

9

GLY

PHE

GLY

ALA

ASP

PHE

SER

10

ASP

ILE

PHE

GLY

ASP

VAL

PHE

GLY

ASP

ILE

11

PHE

GLY

Samples:

sample_1: DNAJ mM; phosphate 50 mM

sample_cond_1: ionic strength: 50 mM; pH: 6.0; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions

Software:

No software information available

NMR spectrometers:

Varian Unity 600 MHz
GE Omega 500 MHz

BMRB	4227
PDB	1BQ0 1BQZ 1XBL
DBJ	BAB33438 BAB96590 BAG75538 BAI23378 BAI28898
EMBL	CAP74585 CAQ30532 CAQ87599 CAQ96906 CAR01382
GB	AAA00009 AAA23693 AAC73126 AAG54315 AAN41681
REF	NP_308042 NP_414556 NP_705974 WP_000240600 WP_001118445
SP	A7ZHA5 A7ZVV8 B1IRF9 B1LFU5 B1XBE0
AlphaFold	A7ZHA5 A7ZVV8 B1IRF9 B1LFU5 B1XBE0