BMRB Entry 4206

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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4206
MolProbity Validation Chart

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Title:
Solution NMR Structure of Linked Cell Attachment Modules of Mouse Fibronectin Containing the RGD and Synergy Regions, 20 Structures
Deposition date:
1998-11-10
Original release date:
2000-03-10
Authors:
Copie, V.; Tomita, Y.; Akiyama, S.; Aota, S.; Yamada, K.; Venable, R.; Pastor, R.; Krueger, S.; Torchia, D.
Citation:

Citation: Copie, V.; Tomita, Y.; Akiyama, S.; Aota, S.; Yamada, K.; Venable, R.; Pastor, R.; Krueger, S.; Torchia, D.. "Solution Structure and Dynamics of Linked Cell Attachment Modules of Mouse Fibronectin Containing the RGD and Synergy Regions: Comparison with the Human Fibronectin Crystal Structure"  J. Mol. Biol. 277, 663-682 (1998).
PubMed: 9533887

Assembly members:

Assembly members:
fibronectin, polymer, 185 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pRSET

Entity Sequences (FASTA):

Entity Sequences (FASTA):
fibronectin: MGLDSPTGFDSSDITANSFT VHWVAPRAPITGYIIRHHAE HSVGRPRQDRVPPSRNSITL TNLNPGTEYVVSIIAVNGRE ESPPLIGQQATVSDIPRDLE VIASTPTSLLISWEPPAVSV RYYRITYGETGGNSPVQEFT VPGSKSTATINNIKPGADYT ITLYAVTGRGDSPASSKPVS INYKT

Data sets:
Data typeCount
13C chemical shifts579
15N chemical shifts178
1H chemical shifts1200

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1fibronectin1

Entities:

Entity 1, fibronectin 185 residues - Formula weight is not available

1   METGLYLEUASPSERPROTHRGLYPHEASP
2   SERSERASPILETHRALAASNSERPHETHR
3   VALHISTRPVALALAPROARGALAPROILE
4   THRGLYTYRILEILEARGHISHISALAGLU
5   HISSERVALGLYARGPROARGGLNASPARG
6   VALPROPROSERARGASNSERILETHRLEU
7   THRASNLEUASNPROGLYTHRGLUTYRVAL
8   VALSERILEILEALAVALASNGLYARGGLU
9   GLUSERPROPROLEUILEGLYGLNGLNALA
10   THRVALSERASPILEPROARGASPLEUGLU
11   VALILEALASERTHRPROTHRSERLEULEU
12   ILESERTRPGLUPROPROALAVALSERVAL
13   ARGTYRTYRARGILETHRTYRGLYGLUTHR
14   GLYGLYASNSERPROVALGLNGLUPHETHR
15   VALPROGLYSERLYSSERTHRALATHRILE
16   ASNASNILELYSPROGLYALAASPTYRTHR
17   ILETHRLEUTYRALAVALTHRGLYARGGLY
18   ASPSERPROALASERSERLYSPROVALSER
19   ILEASNTYRLYSTHR

Samples:

sample_one: fibronectin mM; NaCl 50 mM

sample_conditions_one: ionic strength: 50 mM; pH: 4.2; temperature: 308 K

Experiments:

NameSampleSample stateSample conditions
CBCA(CO)NHsample_onenot availablenot available
CBCANHsample_onenot availablenot available
HBHA(CO)NHsample_onenot availablenot available
C(CO)NHsample_onenot availablenot available
H(CCO)NHsample_onenot availablenot available
HCCH-TOCSYsample_onenot availablenot available
HOHAHAsample_onenot availablenot available
15N,13C-HSQCsample_onenot availablenot available
2D-NOESYsample_onenot availablenot available
3D-NOESYsample_onenot availablenot available
4D-NOESYsample_onenot availablenot available
HNHAsample_onenot availablenot available
HNHBsample_onenot availablenot available
HAHBsample_onenot availablenot available
CCO-SEDsample_onenot availablenot available
CN-SEDsample_onenot availablenot available
LRCCsample_onenot availablenot available
LRCHsample_onenot availablenot available

Software:

No software information available

NMR spectrometers:

  • Bruker DMX 500 MHz
  • Bruker AMX 500 MHz
  • Bruker AMX 600 MHz

Related Database Links:

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CSV: Backbone or all simulated peaks
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