BMRB Entry 4092

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4092

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Complete Heteronuclear NMR Resonance Assignments, Secondary Structure, and Mapping of Core Binding Factor a Binding Site for Core Binding Factor b (1-141)

Deposition date:

1998-01-06

Original release date:

1998-06-09

Authors:

Huang, Xuemei; Speck, Nancy; Bushweller, John

Citation:

Citation: Huang, Xuemei; Speck, Nancy; Bushweller, John. "Complete Heteronuclear NMR Resonance Assignments and Secondary Structure of Core Binding Factor b (1-141)" J. Biomol. NMR 12, 459-460 (1998).

Assembly members:

Assembly members:
Core Binding Factor b subunit, polymer, 143 residues, 16700 Da.

Natural source:

Natural source: Common Name: mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGrxCBFb141

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Core Binding Factor b subunit: GSMPRVVPDQRSKFENEEFF RKLSRECEIKYTGFRDRPHE ERQTRFQNACRDGRSEIAFV ATGTNLSLQFFPASWQGEQR QTPSREYVDLEREAGKVYLK APMILNGVCVIWKGWIDLHR LDGMGCLEFDEERAQQEDAL AQQ

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_one

Data type	Count
13C chemical shifts	653
15N chemical shifts	165
1H chemical shifts	1017

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	CBF-b(141)	1

Entities:

Entity 1, CBF-b(141) 143 residues - 16700 Da.

1

GLY

SER

MET

PRO

ARG

VAL

PRO

ASP

GLN

2

ARG

SER

LYS

PHE

GLU

ASN

GLU

PHE

3

ARG

LYS

LEU

SER

ARG

GLU

CYS

GLU

ILE

LYS

4

TYR

THR

GLY

PHE

ARG

ASP

ARG

PRO

HIS

GLU

5

GLU

ARG

GLN

THR

ARG

PHE

GLN

ASN

ALA

CYS

6

ARG

ASP

GLY

ARG

SER

GLU

ILE

ALA

PHE

VAL

7

ALA

THR

GLY

THR

ASN

LEU

SER

LEU

GLN

PHE

8

PHE

PRO

ALA

SER

TRP

GLN

GLY

GLU

GLN

ARG

9

GLN

THR

PRO

SER

ARG

GLU

TYR

VAL

ASP

LEU

10

GLU

ARG

GLU

ALA

GLY

LYS

VAL

TYR

LEU

LYS

11

ALA

PRO

MET

ILE

LEU

ASN

GLY

VAL

CYS

VAL

12

ILE

TRP

LYS

GLY

TRP

ILE

ASP

LEU

HIS

ARG

13

LEU

ASP

GLY

MET

GLY

CYS

LEU

GLU

PHE

ASP

14

GLU

ARG

ALA

GLN

GLU

ASP

ALA

LEU

15

ALA

GLN

Samples:

sample_one: Core Binding Factor b subunit, [U-15N;U-13C], 1.5 mM; potassium phosphate 25 mM; EDTA 0.1 mM; NaN3 0.1%; D2O 5%; H2O 95%

sample_conditions_one: pH: 6.5; temperature: 293 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	sample_one	not available	sample_conditions_one

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

PDB	1CL3 1E50 1H9D 1ILF 1IO4 2JHB 3WTS 3WTT 3WTU 3WTV 3WTW 3WTX 3WTY 4N9F
DBJ	BAA03424 BAA03425 BAA03426 BAC40748 BAE22149
GB	AAA02868 AAG01553 AAH06763 AAH18509 AAH26749
REF	NP_001013209 NP_001154929 NP_001154930 NP_001178364 NP_001253487
SP	Q08024 Q13951
TPG	DAA20210 DAA20211
AlphaFold	Q08024 Q13951