BMRB Entry 36075

Name: The PHD finger of human Kiaa1045 protein
Published: 2018-04-30

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PDB ID: 5xht
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR36075
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

The PHD finger of human Kiaa1045 protein

Deposition date:

2017-04-24

Original release date:

2018-04-30

Authors:

Miyamoto, K.

Citation:

Citation: Miyamoto, Kazuhide; Yamashita, Ayumi; Saito, Kazuki. "Solution structure of the PHD finger from the human KIAA1045 protein" Protein Sci. 27, 987-992 (2018).
PubMed: 29430827

Assembly members:

Assembly members:
PHD finger protein 24, polymer, 60 residues, 6858.710 Da.
ZINC ION, non-polymer, 65.409 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
PHD finger protein 24: EMCDVCEVWTAESLFPCRVC TRVFHDGCLRRMGYIQGDSA AEVTEMAHTETGWSCHYCDN

Data sets:

assigned_chemical_shifts
- assigned_chemical_shifts_1

Data type	Count
13C chemical shifts	246
15N chemical shifts	55
1H chemical shifts	371

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity_1	1
2	entity_ZN_1	2
3	entity_ZN_2	2

Entities:

Entity 1, entity_1 60 residues - 6858.710 Da.

1	GLU	MET	CYS	ASP	VAL	CYS	GLU	VAL	TRP	THR
2	ALA	GLU	SER	LEU	PHE	PRO	CYS	ARG	VAL	CYS
3	THR	ARG	VAL	PHE	HIS	ASP	GLY	CYS	LEU	ARG
4	ARG	MET	GLY	TYR	ILE	GLN	GLY	ASP	SER	ALA
5	ALA	GLU	VAL	THR	GLU	MET	ALA	HIS	THR	GLU
6	THR	GLY	TRP	SER	CYS	HIS	TYR	CYS	ASP	ASN

Entity 2, entity_ZN_1 - Zn 2 - 65.409 Da.

1

ZN

Name	Sample	Sample state	Sample conditions
3D NOESY	sample_1	isotropic	sample_conditions_1

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CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks

BMRB Entry 36075

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

1	GLU	MET	CYS	ASP	VAL	CYS	GLU	VAL	TRP	THR
2	ALA	GLU	SER	LEU	PHE	PRO	CYS	ARG	VAL	CYS
3	THR	ARG	VAL	PHE	HIS	ASP	GLY	CYS	LEU	ARG
4	ARG	MET	GLY	TYR	ILE	GLN	GLY	ASP	SER	ALA
5	ALA	GLU	VAL	THR	GLU	MET	ALA	HIS	THR	GLU
6	THR	GLY	TRP	SER	CYS	HIS	TYR	CYS	ASP	ASN

1	GLU	MET	CYS	ASP	VAL	CYS	GLU	VAL	TRP	THR
2	ALA	GLU	SER	LEU	PHE	PRO	CYS	ARG	VAL	CYS
3	THR	ARG	VAL	PHE	HIS	ASP	GLY	CYS	LEU	ARG
4	ARG	MET	GLY	TYR	ILE	GLN	GLY	ASP	SER	ALA
5	ALA	GLU	VAL	THR	GLU	MET	ALA	HIS	THR	GLU
6	THR	GLY	TRP	SER	CYS	HIS	TYR	CYS	ASP	ASN

1	GLU	MET	CYS	ASP	VAL	CYS	GLU	VAL	TRP	THR
2	ALA	GLU	SER	LEU	PHE	PRO	CYS	ARG	VAL	CYS
3	THR	ARG	VAL	PHE	HIS	ASP	GLY	CYS	LEU	ARG
4	ARG	MET	GLY	TYR	ILE	GLN	GLY	ASP	SER	ALA
5	ALA	GLU	VAL	THR	GLU	MET	ALA	HIS	THR	GLU
6	THR	GLY	TRP	SER	CYS	HIS	TYR	CYS	ASP	ASN