BMRB Entry 34804
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR34804
MolProbity Validation Chart
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NMR-STAR v3 text file.
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Citation: Ortner, M.; Guschtschin-Schmidt, N.; Stelzer, W.; Muhle-Goll, C.; Langosch, D.. "Permissive Conformations of a Transmembrane Helix Allow Intramembrane Proteolysis by gamma-Secretase" J. Mol. Biol. 435, 168218-168218 (2023).
PubMed: 37536392
Assembly members:
entity_1, polymer, 30 residues, 3365.254 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
entity_1: KKKLHFMYVAAAAFVLLFFV
GCGVLLSKKK
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 97 |
| 1H chemical shifts | 209 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | unit_1 | 1 |
Entities:
Entity 1, unit_1 30 residues - 3365.254 Da.
| 1 | LYS | LYS | LYS | LEU | HIS | PHE | MET | TYR | VAL | ALA | |
| 2 | ALA | ALA | ALA | PHE | VAL | LEU | LEU | PHE | PHE | VAL | |
| 3 | GLY | CYS | GLY | VAL | LEU | LEU | SER | LYS | LYS | LYS |
Samples:
sample_1: Notch1 WT TMD 500 uM
sample_conditions_1: pH: 6.5; pressure: 1 bar; temperature: 300 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
CNS v1.2.1, Brunger, Adams, Clore, Gros, Nilges and Read - refinement
ARIA v2.3.2, Linge, O'Donoghue and Nilges - structure calculation
CcpNmr Analysis v2.4.2, Vranken WF, Boucher W, Stevens TJ, Fogh RH, Pajon A, Llinas M, Ulrich EL, Markley JL, Ionides J, Laue ED. - chemical shift assignment, peak picking
NMR spectrometers:
- Bruker AVANCE III 600 MHz