BMRB Entry 34740

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PDB ID: 8abd
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR34740
MolProbity Validation Chart

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Title:
Solution structure of Phen-DC3 intercalating into a quadruplex-duplex hybrid
Deposition date:
2022-07-04
Original release date:
2022-10-27
Authors:
Vianney, Y.; Weisz, K.
Citation:

Citation: Vianney, Y.; Weisz, K.. "High-affinity binding at quadruplex-duplex junctions: rather the rule than the exception"  Nucleic Acids Res. 50, 11948-11964 (2022).
PubMed: 36416262

Assembly members:

Assembly members:
entity_1, polymer, 36 residues, 11210.249 Da.
entity_PQ3, non-polymer, 550.609 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: 32630   Superkingdom: not available   Kingdom: not available   Genus/species: synthetic construct

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: XTAGGTGGGTAGGGTGGGCT AGTCATTTTGACTAGG

Data sets:
Data typeCount
13C chemical shifts41
1H chemical shifts249

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
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Assembly:

Entity Assembly IDEntity NameEntity ID
1unit_11
2unit_22

Entities:

Entity 1, unit_1 36 residues - 11210.249 Da.

1   THMDTDADGDGDTDGDGDGDT
2   DADGDGDGDTDGDGDGDCDT
3   DADGDTDCDADTDTDTDTDG
4   DADCDTDADGDG

Entity 2, unit_2 - C34 H26 N6 O2 - 550.609 Da.

1   PQ3