BMRB Entry 34118
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR34118
MolProbity Validation Chart
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NMR-STAR v3 text file.
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Citation: Mir, B.; Soles, X.; Gonzalez, C.; Escaja, N.. "The effect of the neutral cytidine protonated analogue pseudoisocytidine on the stability of i-motif structures." Sci. Rep. 7, 2772-2772 (2017).
PubMed: 28584239
Assembly members:
entity_1, polymer, 11 residues, 3275.146 Da.
Natural source: Common Name: not available Taxonomy ID: 32630 Superkingdom: not available Kingdom: not available Genus/species: not available not available
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
entity_1: TCCGTTTCXGT
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 75 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | entity_1, 1 | 1 |
| 2 | entity_1, 2 | 1 |
Entities:
Entity 1, entity_1, 1 11 residues - 3275.146 Da.
| 1 | DT | DC | DC | DG | DT | DT | DT | DC | 8YN | DG | ||||
| 2 | DT |
Samples:
sample_1: DNA (5'-D(*TP*(DCP)P*CP*GP*TP*TP*TP*CP*(PSC)P*GP*T)-3') 0.8 mM; NaCl 100 mM
sample_conditions_1: ionic strength: 100 mM; pH: 7; pressure: 1 atm; temperature: 278 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
AMBER, CASE, DARDEN, CHEATHAM III, SIMMERLING, WANG, DUKE, LUO, ... AND KOLLMAN - refinement
DYANA - structure solution
SPARKY - structure solution
NMR spectrometers:
- Bruker Avance 600 MHz