BMRB Entry 30986

Title:
NMR solution structure of the phosphorylated MUS81-binding region from human SLX4
Deposition date:
2022-02-02
Original release date:
2022-10-13
Authors:
Payliss, B.; Reichheld, S.; Lemak, A.; Sharpe, S.; Arrowsmith, C.; Wyatt, H.
Citation:

Citation: Payliss, Brandon; Tse, Ying Wah; Reichheld, Sean; Lemak, Alexander; Yun, Hwa Young; Houliston, Scott; Patel, Ayushi; Arrowsmith, Cheryl; Sharpe, Simon; Wyatt, Haley. "Phosphorylation of the DNA repair scaffold SLX4 drives folding of the SAP domain and activation of the MUS81-EME1 endonuclease"  Cell Rep. 41, 111537-111537 (2022).
PubMed: 36288699

Assembly members:

Assembly members:
entity_1, polymer, 86 residues, 9956.198 Da.

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli BL21(DE3)

Entity Sequences (FASTA):

Data typeCount
13C chemical shifts357
15N chemical shifts78
1H chemical shifts547

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1unit_11

Entities:

Entity 1, unit_1 86 residues - 9956.198 Da.

1   ALAGLNMETPROSERALAGLYGLYALAGLN
2   LYSPROGLUGLYLEUGLUTPOPROLYSGLY
3   ALAASNARGLYSLYSASNLEUPROPROLYS
4   VALPROILETPOPROMETPROGLNTYRSER
5   ILEMETGLUTPOPROVALLEULYSLYSGLU
6   LEUASPARGPHEGLYVALARGPROLEUPRO
7   LYSARGGLNMETVALLEULYSLEULYSGLU
8   ILEPHEGLNTYRTHRHISGLNTHRLEUASP
9   SERASPSERGLUASPGLU

Samples:

sample_1: Phosphorylated MUS81-binding region of human SLX4, [U-100% 13C; U-100% 15N], 500 uM; sodium phosphate 25 mM; sodium chloride 100 mM; EDTA 100 uM; sodium azide 100 uM

sample_conditions_1: ionic strength: 0.125 M; pH: 7.4; pressure: 1 atm; temperature: 283 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
2D 1H-13C HSQC aliphaticsample_1isotropicsample_conditions_1
2D 1H-13C HSQC aromaticsample_1isotropicsample_conditions_1
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D HNCAsample_1isotropicsample_conditions_1
3D HNHAsample_1isotropicsample_conditions_1
3D HBHA(CO)NHsample_1isotropicsample_conditions_1
3D HNCACBsample_1isotropicsample_conditions_1
3D 1H-15N TOCSYsample_1isotropicsample_conditions_1
3D 1H-15N NOESYsample_1isotropicsample_conditions_1
3D 1H-13C NOESY aliphaticsample_1isotropicsample_conditions_1
3D 1H-13C NOESY aromaticsample_1isotropicsample_conditions_1

Software:

CNS, Brunger, Adams, Clore, Gros, Nilges and Read - refinement

CYANA v2.1, Guntert, Mumenthaler and Wuthrich - structure calculation

FMCGUI, Lemak and Arrowsmith - data analysis

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMRFAM-SPARKY, Lee, Tonelli, and Markley - peak picking

CcpNmr Analysis, CCPN - peak picking

NMR spectrometers:

  • Bruker AVANCE III 700 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks