BMRB Entry 30248

Click here to enlarge.

PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR30248
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
peptide 38146 derived from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)
Deposition date:
2017-02-23
Original release date:
2018-06-07
Authors:
Bermudez, A.; Patarroyo, M.
Citation:

Citation: Bermudez, A.; Patarroyo, M.. "peptide 38146 derived from fragment 41-60 of Plasmodium falciparum Thrombospondin-Related Sporozoite Protein (TRSP)"  .

Assembly members:

Assembly members:
entity_1, polymer, 20 residues, 2459.632 Da.

Natural source:

Natural source:   Common Name: Plasmodium falciparum   Taxonomy ID: 36329   Superkingdom: Eukaryota   Kingdom: not available   Genus/species: Plasmodium falciparum

Experimental source:

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: SDTRYNKDFINNKHLNEHAH

Data sets:
Data typeCount
1H chemical shifts139

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1entity_11

Entities:

Entity 1, entity_1 20 residues - 2459.632 Da.

1   SERASPTHRARGTYRASNLYSASPPHEILE
2   ASNASNLYSHISLEUASNGLUHISALAHIS

Samples:

sample_1: entity_1 16.6 ± 0.1 mg/mL

sample_conditions_1: pH: 3.7; pressure: 1 atm; temperature: 295 K

sample_conditions_2: pH: 3.7; pressure: 1 atm; temperature: 285 K

sample_conditions_3: pH: 3.7; pressure: 1 atm; temperature: 305 K

sample_conditions_4: pH: 3.7; pressure: 1 atm; temperature: 315 K

Experiments:

NameSampleSample stateSample conditions
2D DFQ-COSYsample_1anisotropicsample_conditions_1
2D 1H-1H TOCSYsample_1anisotropicsample_conditions_1
2D 1H-1H NOESYsample_1anisotropicsample_conditions_1
2D 1H-1H TOCSYsample_1anisotropicsample_conditions_2
2D 1H-1H TOCSYsample_1anisotropicsample_conditions_4
2D 1H-1H TOCSYsample_1anisotropicsample_conditions_3

Software:

INSIGHT II - structure solution

TOPSPIN - refinement

NMR spectrometers:

  • Bruker DRX 600 MHz