BMRB Entry 27635
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR27635
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Citation: Marion, Dominique; Gauto, Diego; Ayala, Isabel; Giandoreggio-Barranco, Karine; Schanda, Paul. "Microsecond Protein Dynamics from Combined Bloch-McConnell and Near-Rotary-Resonance R1rho Relaxation-Dispersion MAS NMR" Chemphyschem 20, 276-284 (2019).
PubMed: 30444575
Assembly members:
Ubiquitin, polymer, 76 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET21b
Entity Sequences (FASTA):
Ubiquitin: MQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGG
- heteronucl_T1rho_relaxation
- Ubiquitin_R1rho_2.3kHz
- Ubiquitin_R1rho_2.3kHz_a
- Ubiquitin_R1rho_2.5kHz
- Ubiquitin_R1rho_2.5kHz_a
- Ubiquitin_R1rho_3kHz
- Ubiquitin_R1rho_3kHz_a
- Ubiquitin_R1rho_3.5kHz
- Ubiquitin_R1rho_3.5kHz_a
- Ubiquitin_R1rho_4kHz
- Ubiquitin_R1rho_4.5kHz
- Ubiquitin_R1rho_5kHz
- Ubiquitin_R1rho_5.5kHz
- Ubiquitin_R1rho_6kHz
- Ubiquitin_R1rho_8kHz
- Ubiquitin_R1rho_10kHz
- Ubiquitin_R1rho_12kHz
- Ubiquitin_R1rho_15kHz
- Ubiquitin_R1rho_20kHz
- Ubiquitin_R1rho_22kHz
- Ubiquitin_R1rho_24kHz
- Ubiquitin_R1rho_26kHz
- Ubiquitin_R1rho_28kHz
- Ubiquitin_R1rho_30kHz
- Ubiquitin_R1rho_31kHz
- Ubiquitin_R1rho_32kHz
- Ubiquitin_R1rho_32.5kHz
- Ubiquitin_R1rho_33kHz
| Data type | Count |
| T1rho relaxation values | 1539 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Ubiquitin | 1 |
Entities:
Entity 1, Ubiquitin 76 residues - Formula weight is not available
| 1 | MET | GLN | ILE | PHE | VAL | LYS | THR | LEU | THR | GLY | ||||
| 2 | LYS | THR | ILE | THR | LEU | GLU | VAL | GLU | PRO | SER | ||||
| 3 | ASP | THR | ILE | GLU | ASN | VAL | LYS | ALA | LYS | ILE | ||||
| 4 | GLN | ASP | LYS | GLU | GLY | ILE | PRO | PRO | ASP | GLN | ||||
| 5 | GLN | ARG | LEU | ILE | PHE | ALA | GLY | LYS | GLN | LEU | ||||
| 6 | GLU | ASP | GLY | ARG | THR | LEU | SER | ASP | TYR | ASN | ||||
| 7 | ILE | GLN | LYS | GLU | SER | THR | LEU | HIS | LEU | VAL | ||||
| 8 | LEU | ARG | LEU | ARG | GLY | GLY |
Samples:
sample_1: Ubiquitin, [U-100% 15N], NA mM
sample_conditions_1: temperature: 273 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
Software:
NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - peak picking, processing
Gamma, Scott A. Smith - Spin evolution simulation
NMR spectrometers:
- Agilent INOVA 600 MHz