BMRB Entry 27437
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR27437
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
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Citation: Stoeppler, Daniel; Macpherson, Alex; Smith-Penzel, Susanne; Basse, Nicolas; Lecomte, Fabien; Deboves, Herv; Taylor, Richard; Norman, Tim; Porter, John; Waters, Lorna; Westwood, Marta; Cossins, Ben; Cain, Katharine; White, James; Griffin, Robert; Prosser, Christine; Kelm, Sebastian; Sullivan, Amy; Fox III, David; Carr, Mark; Henry, Alistair; Taylor, Richard; Meier, Beat; Oschkinat, Hartmut; Lawson, Alastair. "Insight into Small Molecule Binding to the Neonatal Fc Receptor by X-ray Crystallography and 100 kHz Magic-Angle-Spinning NMR" PLOS Biology ., .-..
Assembly members:
a-chain, polymer, 274 residues, Formula weight is not available
b2-microglobulin, polymer, 99 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology Host organism: Mammalian HEK293 cells Vector: pMFcRnECD-B2M-Neo
Entity Sequences (FASTA):
a-chain: AESHLSLLYHLTAVSSPAPG
TPAFWVSGWLGPQQYLSYNS
LRGEAEPCGAWVWENQVSWY
WEKETTDLRIKEKLFLEAFK
ALGGKGPYTLQGLLGCELGP
DNTSVPTAKFALNGEEFMNF
DLKQGTWGGDWPEALAISQR
WQQQDKAANKELTFLLFSCP
HRLREHLERGRGNLEWKEPP
SMRLKARPSSPGFSVLTCSA
FSFYPPELQLRFLRNGLAAG
TGQGDFGPNSDGSFHASSSL
TVKSGDEHHYCCIVQHAGLA
QPLRVELESPAKSS
b2-microglobulin: IQRTPKIQVYSRHPAENGKS
NFLNCYVSGFHPSDIEVDLL
KNGERIEKVEHSDLSFSKDW
SFYLLYYTEFTPTEKDEYAC
RVNHVTLSQPKIVKWDRDM
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 173 |
| 15N chemical shifts | 89 |
| 1H chemical shifts | 89 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | a-chain | 1 |
| 2 | b2-microglobulin | 2 |
Entities:
Entity 1, a-chain 274 residues - Formula weight is not available
| 1 | ALA | GLU | SER | HIS | LEU | SER | LEU | LEU | TYR | HIS | ||||
| 2 | LEU | THR | ALA | VAL | SER | SER | PRO | ALA | PRO | GLY | ||||
| 3 | THR | PRO | ALA | PHE | TRP | VAL | SER | GLY | TRP | LEU | ||||
| 4 | GLY | PRO | GLN | GLN | TYR | LEU | SER | TYR | ASN | SER | ||||
| 5 | LEU | ARG | GLY | GLU | ALA | GLU | PRO | CYS | GLY | ALA | ||||
| 6 | TRP | VAL | TRP | GLU | ASN | GLN | VAL | SER | TRP | TYR | ||||
| 7 | TRP | GLU | LYS | GLU | THR | THR | ASP | LEU | ARG | ILE | ||||
| 8 | LYS | GLU | LYS | LEU | PHE | LEU | GLU | ALA | PHE | LYS | ||||
| 9 | ALA | LEU | GLY | GLY | LYS | GLY | PRO | TYR | THR | LEU | ||||
| 10 | GLN | GLY | LEU | LEU | GLY | CYS | GLU | LEU | GLY | PRO | ||||
| 11 | ASP | ASN | THR | SER | VAL | PRO | THR | ALA | LYS | PHE | ||||
| 12 | ALA | LEU | ASN | GLY | GLU | GLU | PHE | MET | ASN | PHE | ||||
| 13 | ASP | LEU | LYS | GLN | GLY | THR | TRP | GLY | GLY | ASP | ||||
| 14 | TRP | PRO | GLU | ALA | LEU | ALA | ILE | SER | GLN | ARG | ||||
| 15 | TRP | GLN | GLN | GLN | ASP | LYS | ALA | ALA | ASN | LYS | ||||
| 16 | GLU | LEU | THR | PHE | LEU | LEU | PHE | SER | CYS | PRO | ||||
| 17 | HIS | ARG | LEU | ARG | GLU | HIS | LEU | GLU | ARG | GLY | ||||
| 18 | ARG | GLY | ASN | LEU | GLU | TRP | LYS | GLU | PRO | PRO | ||||
| 19 | SER | MET | ARG | LEU | LYS | ALA | ARG | PRO | SER | SER | ||||
| 20 | PRO | GLY | PHE | SER | VAL | LEU | THR | CYS | SER | ALA | ||||
| 21 | PHE | SER | PHE | TYR | PRO | PRO | GLU | LEU | GLN | LEU | ||||
| 22 | ARG | PHE | LEU | ARG | ASN | GLY | LEU | ALA | ALA | GLY | ||||
| 23 | THR | GLY | GLN | GLY | ASP | PHE | GLY | PRO | ASN | SER | ||||
| 24 | ASP | GLY | SER | PHE | HIS | ALA | SER | SER | SER | LEU | ||||
| 25 | THR | VAL | LYS | SER | GLY | ASP | GLU | HIS | HIS | TYR | ||||
| 26 | CYS | CYS | ILE | VAL | GLN | HIS | ALA | GLY | LEU | ALA | ||||
| 27 | GLN | PRO | LEU | ARG | VAL | GLU | LEU | GLU | SER | PRO | ||||
| 28 | ALA | LYS | SER | SER |
Entity 2, b2-microglobulin 99 residues - Formula weight is not available
| 1 | ILE | GLN | ARG | THR | PRO | LYS | ILE | GLN | VAL | TYR | ||||
| 2 | SER | ARG | HIS | PRO | ALA | GLU | ASN | GLY | LYS | SER | ||||
| 3 | ASN | PHE | LEU | ASN | CYS | TYR | VAL | SER | GLY | PHE | ||||
| 4 | HIS | PRO | SER | ASP | ILE | GLU | VAL | ASP | LEU | LEU | ||||
| 5 | LYS | ASN | GLY | GLU | ARG | ILE | GLU | LYS | VAL | GLU | ||||
| 6 | HIS | SER | ASP | LEU | SER | PHE | SER | LYS | ASP | TRP | ||||
| 7 | SER | PHE | TYR | LEU | LEU | TYR | TYR | THR | GLU | PHE | ||||
| 8 | THR | PRO | THR | GLU | LYS | ASP | GLU | TYR | ALA | CYS | ||||
| 9 | ARG | VAL | ASN | HIS | VAL | THR | LEU | SER | GLN | PRO | ||||
| 10 | LYS | ILE | VAL | LYS | TRP | ASP | ARG | ASP | MET |
Samples:
sample_1: a-chain, [U-100% 13C; U-100% 15N], 550 uM; b2-microglobulin, [U-100% 13C; U-100% 15N], 550 uM; NaCl 100 mM
sample_conditions_1: ionic strength: 100 mM; pH: 7.4; pressure: 1 atm; temperature: 283 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCA | sample_1 | isotropic | sample_conditions_1 |
| 3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
| 3D HN(CO)CA | sample_1 | isotropic | sample_conditions_1 |
Software:
CCPN, CCPN - chemical shift assignment
NMR spectrometers:
- Bruker Avance 850 MHz
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks