BMRB Entry 27344

Name: Backbone 1H, 13C, 15N Chemical Shift Assignments of GA Seq5
Published: 2018-03-08

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR27344

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

Backbone 1H, 13C, 15N Chemical Shift Assignments of GA Seq5

Deposition date:

2017-12-19

Original release date:

2018-03-08

Authors:

Tian, Pengfei; Louis, John; Baber, James; Best, Robert

Citation:

Citation: Tian, Pengfei; Louis, John; Baber, James; Aniana, A.; Best, Robert. "Co-evolutionary fitness landscapes for sequence design" Angew. Chem. Int. Ed. Engl. 57, 5674-5678 (2018).
PubMed: 29512300

Assembly members:

Assembly members:
GA_Seq5, polymer, 68 residues, Formula weight is not available

Natural source:

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: na

Entity Sequences (FASTA):

Entity Sequences (FASTA):
GA_Seq5: GSSHHHHHHSSGMESAKAAE LAEAKKAALDEFEKYGVSDY FKKLVENAKTVDGVWALQAQ VVESLPTE

Data sets:

RDCs
- RDC_list_1
assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	115
15N chemical shifts	57
1H chemical shifts	199
residual dipolar couplings	33

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	GA Seq5 monomer	1

Entities:

Entity 1, GA Seq5 monomer 68 residues - Formula weight is not available

1

GLY

SER

HIS

SER

2

SER

GLY

MET

GLU

SER

ALA

LYS

ALA

GLU

3

LEU

ALA

GLU

ALA

LYS

ALA

LEU

ASP

4

GLU

PHE

GLU

LYS

TYR

GLY

VAL

SER

ASP

TYR

5

PHE

LYS

LEU

VAL

GLU

ASN

ALA

LYS

THR

6

VAL

ASP

GLY

VAL

TRP

ALA

LEU

GLN

ALA

GLN

7

VAL

GLU

SER

LEU

PRO

THR

GLU

Samples:

sample_1: GA Seq5, [U-99% 13C; U-99% 15N], 0.67 mM; sodium phosphate 50 mM

sample_2: GA Seq5, [U-99% 13C; U-99% 15N], 0.67 mM; sodium phosphate 50 mM; pf1 phage 13 mg/mL

sample_conditions_1: ionic strength: 50 mM; pH: 7; pressure: 2 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC IPAP	sample_2	anisotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1

Software:

ccpnmr, CCPN - chemical shift assignment

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMR spectrometers:

Bruker Avance 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks