BMRB Entry 26587

Name: Backbone chemical shifts of Roquin ROQ domain in complex with Ox40 stem-hexa-loop RNA
Published: 2016-10-04

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR26587

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone chemical shifts of Roquin ROQ domain in complex with Ox40 stem-hexa-loop RNA

Deposition date:

2015-06-16

Original release date:

2016-10-04

Authors:

Schlundt, Andreas; Sattler, Michael

Citation:

Citation: Janowski, Robert; Heinz, Gitta; Schlundt, Andreas; Wommelsdorf, Nina; Brenner, Sven; Gruber, Andreas; Blank, Michael; Buch, Thorsten; Buhmann, Raymund; Zavolan, Mihaela; Niessing, Dierk; Heissmeyer, Vigo; Sattler, Michael. "Roquin recognizes a non-canonical hexaloop structure in the 3'-UTR of Ox40" Nat. Comm. 7, 11032-11032 (2016).
PubMed: 27010430

Assembly members:

Assembly members:
Roquin_ROQ_domain, polymer, 151 residues, 17773.4 Da.

Natural source:

Natural source: Common Name: house mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pETTrx1a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Roquin_ROQ_domain: PQQLSSNLWAAVRARGCQFL GPAMQEEALKLVLLALEDGS ALSRKVLVLFVVQRLEPRFP QASKTSIGHVVQLLYRASCF KVTKRDEDSSLMQLKEEFRT YEALRREHDSQIVQIAMEAG LRIAPDQWSSLLYGDQSHKS HMQSIIDKLQT

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	296
15N chemical shifts	144
1H chemical shifts	144

Additional metadata:

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Samples and Experiments
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