BMRB Entry 26057

Name: Solution Structure of Mutant of BMAP-28(1-18)
Published: 2017-09-11

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PDB ID: 2nde
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR26057
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of Mutant of BMAP-28(1-18)

Deposition date:

2016-05-12

Original release date:

2017-09-11

Authors:

Agadi, Nutan; Kumar, Ashutosh

Citation:

Citation: Agadi, Nutan; Kumar, Ashutosh. "Structure, Function And Membrane Interaction Studies of Two Synthetic Peptides Using Solution And Solid State NMR" .

Assembly members:

Assembly members:
entity, polymer, 18 residues, 1999.514 Da.

Natural source:

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: IGLRGLGRKIALIHKKYG

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	57
1H chemical shifts	132

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity	1

Entities:

Entity 1, entity 18 residues - 1999.514 Da.

1

ILE

GLY

LEU

ARG

GLY

LEU

GLY

ARG

LYS

ILE

2

ALA

LEU

ILE

HIS

LYS

TYR

GLY

Samples:

sample_1: sodium phosphate 20 mM; D2O, [U-99% 2H], 10%; H2O 90%; SDS, [U-99% 2H], 50 mM

sample_conditions_1: ionic strength: 0 M; pH: 6.6; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1

Software:

TOPSPIN, Bruker Biospin - processing

ccpnmr, CCPN - chemical shift assignment

CYANA, Guntert, Mumenthaler and Wuthrich - chemical shift assignment

CNS, Brunger, Adams, Clore, Gros, Nilges and Read - refinement

NMR spectrometers:

Bruker ASCEND 750 MHz
Bruker Avance 700 MHz