BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 25696

Title: human CFTR NBD1 deltaRI chemical shift assignments   PubMed: 26149808

Deposition date: 2015-07-09 Original release date: 2015-08-12

Authors: Chong, Andrew; Forman-Kay, Julie

Citation: Chong, Andrew; Farber, Patrick; Vernon, Robert; Hudson, Rhea; Mittermaier, Anthony; Forman-Kay, Julie. "Deletion of Phenylalanine-508 in the First Nucleotide Binding Domain of the Cystic Fibrosis Transmembrane Conductance Regulator Increases Conformational Exchange and Inhibits Dimerization"  J. Biol. Chem. 290, 22862-22878 (2015).

Assembly members:
hCFTR_NBD1_delta_RI, polymer, 229 residues, Formula weight is not available

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET-SUMO hNBD1 deltaRI WT

Entity Sequences (FASTA):
hCFTR_NBD1_delta_RI: SLTTTEVVMENVTAFWEEGG TPVLKDINFKIERGQLLAVA GSTGAGKTSLLMMIMGELEP SEGKIKHSGRISFCSQFSWI MPGTIKENIIFGVSYDEYRY RSVIKACQLEEDISKFAEKD NIVLGEGGITLSGGQRARIS LARAVYKDADLYLLDSPFGY LDVLTEKEIFESCVCKLMAN KTRILVTSKMEHLKKADKIL ILHEGSSYFYGTFSELQNLQ PDFSSKLMG

Data sets:
Data typeCount
13C chemical shifts585
15N chemical shifts201
1H chemical shifts201

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1hCFTR NBD1 delta RI1

Entities:

Entity 1, hCFTR NBD1 delta RI 229 residues - Formula weight is not available

1   SERLEUTHRTHRTHRGLUVALVALMETGLU
2   ASNVALTHRALAPHETRPGLUGLUGLYGLY
3   THRPROVALLEULYSASPILEASNPHELYS
4   ILEGLUARGGLYGLNLEULEUALAVALALA
5   GLYSERTHRGLYALAGLYLYSTHRSERLEU
6   LEUMETMETILEMETGLYGLULEUGLUPRO
7   SERGLUGLYLYSILELYSHISSERGLYARG
8   ILESERPHECYSSERGLNPHESERTRPILE
9   METPROGLYTHRILELYSGLUASNILEILE
10   PHEGLYVALSERTYRASPGLUTYRARGTYR
11   ARGSERVALILELYSALACYSGLNLEUGLU
12   GLUASPILESERLYSPHEALAGLULYSASP
13   ASNILEVALLEUGLYGLUGLYGLYILETHR
14   LEUSERGLYGLYGLNARGALAARGILESER
15   LEUALAARGALAVALTYRLYSASPALAASP
16   LEUTYRLEULEUASPSERPROPHEGLYTYR
17   LEUASPVALLEUTHRGLULYSGLUILEPHE
18   GLUSERCYSVALCYSLYSLEUMETALAASN
19   LYSTHRARGILELEUVALTHRSERLYSMET
20   GLUHISLEULYSLYSALAASPLYSILELEU
21   ILELEUHISGLUGLYSERSERTYRPHETYR
22   GLYTHRPHESERGLULEUGLNASNLEUGLN
23   PROASPPHESERSERLYSLEUMETGLY

Samples:

sample_1: hCFTR NBD1 delta RI, [U-99% 13C; U-99% 15N; 50% 2H ], 1 mM; sodium phosphate 50 mM; sodium chloride 150 mM; glycerol 274 mM; magnesium chloride 5 mM; sodium azide .08 mM; DTT 5 mM; adenosine triphosphate 5 mM; H2O 90%; D2O 10%

sample_conditions_1: pH: 7.6; pressure: 1 atm; temperature: 293.15 K

Experiments:

NameSampleSample stateSample conditions
3D HNCAsample_1isotropicsample_conditions_1
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D HCACOsample_1isotropicsample_conditions_1

Software:

NMRView v5.2.2, Johnson, One Moon Scientific - chemical shift assignment

NMR spectrometers:

  • Varian INOVA 600 MHz

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts