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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25343
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry
Citation: Yang, Jun; Zhu, Liang; Zhang, Hao; Hirbawi, Jamila; Fukuda, Koichi; Dwivedi, Pallavi; Liu, Jianmin; Byzova, Tatiana; Plow, Edward; Wu, Jinhua; Qin, Jun. "Conformational activation of talin by RIAM triggers integrin-mediated cell adhesion" Nat. Commun. ., .-..
Assembly members:
RIAM-N_peptide, polymer, 24 residues, 2642.966 Da.
Talin-F3, polymer, 93 residues, 10696.451 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: chemical synthesis Host organism: na Vector: na
Entity Sequences (FASTA):
RIAM-N_peptide: DIDQMFSTLLGEMDLLTQSL
GVDT
Talin-F3: YGVSFFLVKEKMKGKNKLVP
RLLGITKECVMRVDEKTKEV
IQEWSLTNIKRWAASPKSFT
LDFGDYQDGYYSVQTTEGEQ
IAQLIAGYIDIIL
Data type | Count |
1H chemical shifts | 751 |
15N chemical shifts | 90 |
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | RIAM-N_peptide | 1 |
2 | Talin-F3 | 2 |
Entity 1, RIAM-N_peptide 24 residues - 2642.966 Da.
1 | ASP | ILE | ASP | GLN | MET | PHE | SER | THR | LEU | LEU | ||||
2 | GLY | GLU | MET | ASP | LEU | LEU | THR | GLN | SER | LEU | ||||
3 | GLY | VAL | ASP | THR |
Entity 2, Talin-F3 93 residues - 10696.451 Da.
1 | TYR | GLY | VAL | SER | PHE | PHE | LEU | VAL | LYS | GLU | ||||
2 | LYS | MET | LYS | GLY | LYS | ASN | LYS | LEU | VAL | PRO | ||||
3 | ARG | LEU | LEU | GLY | ILE | THR | LYS | GLU | CYS | VAL | ||||
4 | MET | ARG | VAL | ASP | GLU | LYS | THR | LYS | GLU | VAL | ||||
5 | ILE | GLN | GLU | TRP | SER | LEU | THR | ASN | ILE | LYS | ||||
6 | ARG | TRP | ALA | ALA | SER | PRO | LYS | SER | PHE | THR | ||||
7 | LEU | ASP | PHE | GLY | ASP | TYR | GLN | ASP | GLY | TYR | ||||
8 | TYR | SER | VAL | GLN | THR | THR | GLU | GLY | GLU | GLN | ||||
9 | ILE | ALA | GLN | LEU | ILE | ALA | GLY | TYR | ILE | ASP | ||||
10 | ILE | ILE | LEU |
sample_1: Talin-F3, [U-15N], 0.5 mM; sodium phosphate 50 mM; sodium chloride 50 mM; sodium azide 2 mM; DSS 1 mM; D2O 5%; H2O 95%
sample_2: RIAM-N peptide 1.5 mM; Talin-F3, [U-15N; U-2H], 0.5 mM; sodium phosphate 50 mM; sodium chloride 50 mM; sodium azide 2 mM; DSS 1 mM; D2O 5%; H2O 95%
sample_conditions_1: temperature: 273 K; pH: 6.8; pressure: 1 atm; ionic strength: 50 mM
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
3D 1H-15N NOESY | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N NOESY | sample_2 | isotropic | sample_conditions_1 |
2D 1H-1H TOCSY (N/C-filtered) | sample_2 | isotropic | sample_conditions_1 |
2D 1H-1H NOESY (N/C-filtered) | sample_2 | isotropic | sample_conditions_1 |
NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
PIPP, Garrett - data analysis
SPARKY, Goddard - data analysis
X-PLOR_NIH, Schwieters, Kuszewski, Tjandra and Clore - structure solution
Procheck, Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton - evaluation
PDB | |
DBJ | BAA91384 BAC30983 BAC41256 BAE36853 BAG64612 BAA82979 BAC30516 BAC65702 BAE27781 BAG09941 |
EMBL | CAM24322 CAA39588 CDQ87146 |
GB | AAH23110 AAH35636 AAH54516 AAN75525 AIC60178 AAD13152 AAF23322 AAF27330 AAH42923 AAI21760 |
REF | NP_001094047 NP_061916 NP_062329 XP_001101993 XP_003269424 NP_001034114 NP_001192357 NP_006280 NP_035732 NP_989854 |
SP | Q7Z5R6 Q8R5A3 P26039 P54939 Q9Y490 |
BMRB | 15792 16932 |
PRF | 1617167A |
TPG | DAA26829 |
AlphaFold | Q8R5A3 Q7Z5R6 P26039 Q9Y490 P54939 |
Download HSQC peak lists in one of the following formats:
CSV: Backbone
or all simulated peaks
SPARKY: Backbone
or all simulated peaks