BMRB Entry 25288

Name: Solution structure of the TRIM19 B-box1 (B1) of human promyelocytic leukemia (PML)
Published: 2014-11-10

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PDB ID: 2mvw
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25288
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of the TRIM19 B-box1 (B1) of human promyelocytic leukemia (PML)

Deposition date:

2014-10-17

Original release date:

2014-11-10

Authors:

Huang, Shu-Yu; Naik, Mandar; Fan, Pei-Ju; Wang, Ying-Hui; Chang, Chi-Fon; Huang, Tai-Huang

Citation:

Citation: Huang, Shu-Yu; Naik, Mandar; Wang, Ying-Hui; Chang, Chi-Fon; Fan, Pei-Ju; Shih, Hsiu-Ming; Huang, Tai-Huang. "NMR structure note: The B-box 1 dimer of human promyelocytic leukemia protein" J. Biomol. NMR 60, 275-281 (2014).
PubMed: 25355412

Assembly members:

Assembly members:
entity_1, polymer, 51 residues, 5941.833 Da.
entity_ZN, non-polymer, 65.409 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGEX4T-1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity_1: GSRQIVDAQAVCTRCKESAD FWCFECEQLLCAKCFEAHQW FLKHEARPLAE

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	362
15N chemical shifts	108
1H chemical shifts	698

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	entity_1_1	1
2	entity_1_2	1
3	ZINC ION_1	2
4	ZINC ION_2	2
5	ZINC ION_3	2
6	ZINC ION_4	2

Entities:

Entity 1, entity_1_1 51 residues - 5941.833 Da.

GLY A 118, SER A 119, GLY B 118, SER B 119 come from expression tag.

1

GLY

SER

ARG

GLN

ILE

VAL

ASP

ALA

GLN

ALA

2

VAL

CYS

THR

ARG

CYS

LYS

GLU

SER

ALA

ASP

3

PHE

TRP

CYS

PHE

GLU

CYS

GLU

GLN

LEU

4

CYS

ALA

LYS

CYS

PHE

GLU

ALA

HIS

GLN

TRP

5

PHE

LEU

LYS

HIS

GLU

ALA

ARG

PRO

LEU

ALA

6

GLU

Entity 2, ZINC ION_1 - Zn - 65.409 Da.

1

ZN

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1H COSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aliphatic	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY aliphatic	sample_2	isotropic	sample_conditions_1
13C-edited/12C-filtered 3D NOESY-HSQC	sample_3	isotropic	sample_conditions_1

PDB	2MVW
DBJ	BAD92187 BAD92288 BAD92648 BAG10798 BAG62579
EMBL	CAA44841
GB	AAA59972 AAA60125 AAA60126 AAA60351 AAA60352
PIR	S42517 S42518 S44380
REF	NP_001035900 NP_001266170 NP_001266654 NP_001267024 NP_002666
SP	P29590
AlphaFold	P29590

BMRB Entry 25288

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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