BMRB Entry 25032

Name: Solution structure of a bacterial immunoglobulin-like domain form a surface protein of Leptospira
Published: 2014-07-14

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PDB ID: 2mqg
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25032
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of a bacterial immunoglobulin-like domain form a surface protein of Leptospira

Deposition date:

2014-06-19

Original release date:

2014-07-14

Authors:

Mei, Song

Citation:

Citation: Mei, Song. "Solution structure of a bacterial immunoglobulin-like domain form a surface protein of Leptospira" .

Assembly members:

Assembly members:
entity, polymer, 102 residues, 10426.439 Da.

Natural source:

Natural source: Common Name: spirochetes Taxonomy ID: 44276 Superkingdom: Bacteria Kingdom: not available Genus/species: Leptospira interrogans

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: PQE30

Entity Sequences (FASTA):

Entity Sequences (FASTA):
entity: ENIDITVSAATLSSISISPI NTNINTTVSKQFFAVGTYSD GTKADLTSSVTWSSSNQSQA KVSNASETKGLVTGIASGNP TIIATYGSVSGNTILTVNKT DT

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
1H chemical shifts	487
13C chemical shifts	193
15N chemical shifts	108

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	surface protein of Leptospira	1

Entities:

Entity 1, surface protein of Leptospira 102 residues - 10426.439 Da.

1

GLU

ASN

ILE

ASP

ILE

THR

VAL

SER

ALA

2

THR

LEU

SER

ILE

SER

ILE

SER

PRO

ILE

3

ASN

THR

ASN

ILE

ASN

THR

VAL

SER

LYS

4

GLN

PHE

ALA

VAL

GLY

THR

TYR

SER

ASP

5

GLY

THR

LYS

ALA

ASP

LEU

THR

SER

VAL

6

THR

TRP

SER

ASN

GLN

SER

GLN

ALA

7

LYS

VAL

SER

ASN

ALA

SER

GLU

THR

LYS

GLY

8

LEU

VAL

THR

GLY

ILE

ALA

SER

GLY

ASN

PRO

9

THR

ILE

ALA

THR

TYR

GLY

SER

VAL

SER

10

GLY

ASN

THR

ILE

LEU

THR

VAL

ASN

LYS

THR

11

ASP

THR

Samples:

sample_1: H2O 90%; D2O 10%

sample_conditions_1: temperature: 293 K; pH: 6.5; pressure: 1 atm; ionic strength: 100 mM

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1

Software:

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

Bruker AMX 600 MHz