BMRB Entry 25009

Name: Cysteine Deleted Protegrin-1 (CDP-1): Anti-bacterial Activity, Outer-Membrane Disruption and Selectivity
Published: 2014-07-28

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PDB ID: 2mq2
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR25009
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Cysteine Deleted Protegrin-1 (CDP-1): Anti-bacterial Activity, Outer-Membrane Disruption and Selectivity

Deposition date:

2014-06-11

Original release date:

2014-07-28

Authors:

Mohanram, Harini; Bhattacharjya, Surajit

Citation:

Citation: Mohanram, Harini; Bhattacharjya, Surajit. "Cysteine deleted protegrin-1 (CDP-1): Anti-bacterial activity, outer-membrane disruption and selectivity." Biochim. Biophys. Acta 1840, 3006-3016 (2014).
PubMed: 24997421

Assembly members:

Assembly members:
CDP-1, polymer, 14 residues, 1754.115 Da.

Natural source:

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source:

Experimental source: Production method: chemical synthesis Host organism: Escherichia coli Vector: na

Entity Sequences (FASTA):

Entity Sequences (FASTA):
CDP-1: RGGRLYRRRFVVGR

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
1H chemical shifts	65

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Cysteine Deleted Protegrin-1 (CDP-1): rr14	1

Entities:

Entity 1, Cysteine Deleted Protegrin-1 (CDP-1): rr14 14 residues - 1754.115 Da.

1

ARG

GLY

ARG

LEU

TYR

ARG

PHE

2

VAL

GLY

ARG

Samples:

sample_1: CDP-1 55.1 mM; H2O 90%; D2O, [U-100% 2H], 10%

sample_conditions_1: temperature: 278 K; pH: 4.5; pressure: 1 atm; ionic strength: 55.1 mM

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1

Software:

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

Bruker DRX 600 MHz