BMRB Entry 2229

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR2229

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title:

The Role of an Active Site Histidine in the Catalytic Mechanism of Aspartate Transcarbamoylase

Deposition date:

1995-07-31

Original release date:

1995-07-31

Authors:

Kleanthous, Colin; Wemmer, David; Schachman, H.

Citation:

Citation: Kleanthous, Colin; Wemmer, David; Schachman, H.. "The Role of an Active Site Histidine in the Catalytic Mechanism of Aspartate Transcarbamoylase" J. Biol. Chem. 263, 13062-13067 (1988).

Assembly members:

Assembly members:
aspartate transcarbamoylase, polymer, 310 residues, Formula weight is not available

Natural source:

Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Eubacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: not available

Entity Sequences (FASTA):

Entity Sequences (FASTA):
aspartate transcarbamoylase: ANPLYQKHIISINDLSRDDL NLVLATAAKLKANPQPELLK HKVIASCFFEASTRTRLSFQ TSMHRLGASVVGFSDSANTS LGKKGETLADTISVISTYVD AIVMRHPQEGAARLATEFSG NVPVLNAGDGSNQHPTQTLL DLFTIQQTEGRLDNLHVAMV GDLKYGRTVHSLTQALAKFD GNRFYFIAPDALAMPEYILD MLDEKGIAWSLHSSIEEVMA EVDILYMTRVQKERLDPSEY ANVKAQFVLRASDLHNAKAN MKVLHPLPRVDEIATDVDKT PHAWYFQQAGNGIFARQALL ALVLNRDLVL

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_data_set_one

Data type	Count
13C chemical shifts	1

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	aspartate transcarbamoylase	1

Entities:

Entity 1, aspartate transcarbamoylase 310 residues - Formula weight is not available

1	ALA	ASN	PRO	LEU	TYR	GLN	LYS	HIS	ILE	ILE
2	SER	ILE	ASN	ASP	LEU	SER	ARG	ASP	ASP	LEU
3	ASN	LEU	VAL	LEU	ALA	THR	ALA	ALA	LYS	LEU
4	LYS	ALA	ASN	PRO	GLN	PRO	GLU	LEU	LEU	LYS
5	HIS	LYS	VAL	ILE	ALA	SER	CYS	PHE	PHE	GLU
6	ALA	SER	THR	ARG	THR	ARG	LEU	SER	PHE	GLN
7	THR	SER	MET	HIS	ARG	LEU	GLY	ALA	SER	VAL
8	VAL	GLY	PHE	SER	ASP	SER	ALA	ASN	THR	SER
9	LEU	GLY	LYS	LYS	GLY	GLU	THR	LEU	ALA	ASP
10	THR	ILE	SER	VAL	ILE	SER	THR	TYR	VAL	ASP
11	ALA	ILE	VAL	MET	ARG	HIS	PRO	GLN	GLU	GLY
12	ALA	ALA	ARG	LEU	ALA	THR	GLU	PHE	SER	GLY
13	ASN	VAL	PRO	VAL	LEU	ASN	ALA	GLY	ASP	GLY
14	SER	ASN	GLN	HIS	PRO	THR	GLN	THR	LEU	LEU
15	ASP	LEU	PHE	THR	ILE	GLN	GLN	THR	GLU	GLY
16	ARG	LEU	ASP	ASN	LEU	HIS	VAL	ALA	MET	VAL
17	GLY	ASP	LEU	LYS	TYR	GLY	ARG	THR	VAL	HIS
18	SER	LEU	THR	GLN	ALA	LEU	ALA	LYS	PHE	ASP
19	GLY	ASN	ARG	PHE	TYR	PHE	ILE	ALA	PRO	ASP
20	ALA	LEU	ALA	MET	PRO	GLU	TYR	ILE	LEU	ASP
21	MET	LEU	ASP	GLU	LYS	GLY	ILE	ALA	TRP	SER
22	LEU	HIS	SER	SER	ILE	GLU	GLU	VAL	MET	ALA
23	GLU	VAL	ASP	ILE	LEU	TYR	MET	THR	ARG	VAL
24	GLN	LYS	GLU	ARG	LEU	ASP	PRO	SER	GLU	TYR
25	ALA	ASN	VAL	LYS	ALA	GLN	PHE	VAL	LEU	ARG
26	ALA	SER	ASP	LEU	HIS	ASN	ALA	LYS	ALA	ASN
27	MET	LYS	VAL	LEU	HIS	PRO	LEU	PRO	ARG	VAL
28	ASP	GLU	ILE	ALA	THR	ASP	VAL	ASP	LYS	THR
29	PRO	HIS	ALA	TRP	TYR	PHE	GLN	GLN	ALA	GLY
30	ASN	GLY	ILE	PHE	ALA	ARG	GLN	ALA	LEU	LEU
31	ALA	LEU	VAL	LEU	ASN	ARG	ASP	LEU	VAL	LEU

Samples:

sample_one:

sample_condition_set_one: pH: 6.4 na; temperature: 283 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	sample_one	not available	sample_condition_set_one

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

PDB	1ACM 1AT1 1D09 1EKX 1EZZ 1F1B 1GQ3 1I5O 1NBE 1Q95 1R0B 1R0C 1RAA 1RAB 1RAC 1RAD 1RAE 1RAF 1RAG 1RAH 1RAI 1SKU 1TTH 1TU0 1TUG 1XJW 1ZA1 1ZA2 2A0F 2AIR 2AT1 2FZC 2FZG 2FZK 2H3E 2HSE 2IPO 2QG9 2QGF 3AT1 3CSU 3D7S 3MPU 3NPM 4AT1 4E2F 4F04 4FYV 4FYW 4FYX 4FYY 4KGV 4KGX 4KGZ 4KH0 4KH1 4WTO 5AT1 6AT1 7AT1 8AT1 8ATC 9ATC
DBJ	BAB38645 BAE78244 BAG80076 BAI28551 BAI33723
EMBL	CAP78763 CAQ34594 CAQ91746 CAR01219 CAR05983
GB	AAA24474 AAA24476 AAA97142 AAC77202 AAG59443
PIR	G86122
REF	NP_313249 NP_418666 NP_709956 WP_000002014 WP_000013029
SP	A1AJF0 A7ZVC7 A8A803 B1ISW0 B1LRD2
AlphaFold	A1AJF0 A7ZVC7 A8A803 B1ISW0 B1LRD2

1	ALA	ASN	PRO	LEU	TYR	GLN	LYS	HIS	ILE	ILE
2	SER	ILE	ASN	ASP	LEU	SER	ARG	ASP	ASP	LEU
3	ASN	LEU	VAL	LEU	ALA	THR	ALA	ALA	LYS	LEU
4	LYS	ALA	ASN	PRO	GLN	PRO	GLU	LEU	LEU	LYS
5	HIS	LYS	VAL	ILE	ALA	SER	CYS	PHE	PHE	GLU
6	ALA	SER	THR	ARG	THR	ARG	LEU	SER	PHE	GLN
7	THR	SER	MET	HIS	ARG	LEU	GLY	ALA	SER	VAL
8	VAL	GLY	PHE	SER	ASP	SER	ALA	ASN	THR	SER
9	LEU	GLY	LYS	LYS	GLY	GLU	THR	LEU	ALA	ASP
10	THR	ILE	SER	VAL	ILE	SER	THR	TYR	VAL	ASP
11	ALA	ILE	VAL	MET	ARG	HIS	PRO	GLN	GLU	GLY
12	ALA	ALA	ARG	LEU	ALA	THR	GLU	PHE	SER	GLY
13	ASN	VAL	PRO	VAL	LEU	ASN	ALA	GLY	ASP	GLY
14	SER	ASN	GLN	HIS	PRO	THR	GLN	THR	LEU	LEU
15	ASP	LEU	PHE	THR	ILE	GLN	GLN	THR	GLU	GLY
16	ARG	LEU	ASP	ASN	LEU	HIS	VAL	ALA	MET	VAL
17	GLY	ASP	LEU	LYS	TYR	GLY	ARG	THR	VAL	HIS
18	SER	LEU	THR	GLN	ALA	LEU	ALA	LYS	PHE	ASP
19	GLY	ASN	ARG	PHE	TYR	PHE	ILE	ALA	PRO	ASP
20	ALA	LEU	ALA	MET	PRO	GLU	TYR	ILE	LEU	ASP
21	MET	LEU	ASP	GLU	LYS	GLY	ILE	ALA	TRP	SER
22	LEU	HIS	SER	SER	ILE	GLU	GLU	VAL	MET	ALA
23	GLU	VAL	ASP	ILE	LEU	TYR	MET	THR	ARG	VAL
24	GLN	LYS	GLU	ARG	LEU	ASP	PRO	SER	GLU	TYR
25	ALA	ASN	VAL	LYS	ALA	GLN	PHE	VAL	LEU	ARG
26	ALA	SER	ASP	LEU	HIS	ASN	ALA	LYS	ALA	ASN
27	MET	LYS	VAL	LEU	HIS	PRO	LEU	PRO	ARG	VAL
28	ASP	GLU	ILE	ALA	THR	ASP	VAL	ASP	LYS	THR
29	PRO	HIS	ALA	TRP	TYR	PHE	GLN	GLN	ALA	GLY
30	ASN	GLY	ILE	PHE	ALA	ARG	GLN	ALA	LEU	LEU
31	ALA	LEU	VAL	LEU	ASN	ARG	ASP	LEU	VAL	LEU

1	ALA	ASN	PRO	LEU	TYR	GLN	LYS	HIS	ILE	ILE
2	SER	ILE	ASN	ASP	LEU	SER	ARG	ASP	ASP	LEU
3	ASN	LEU	VAL	LEU	ALA	THR	ALA	ALA	LYS	LEU
4	LYS	ALA	ASN	PRO	GLN	PRO	GLU	LEU	LEU	LYS
5	HIS	LYS	VAL	ILE	ALA	SER	CYS	PHE	PHE	GLU
6	ALA	SER	THR	ARG	THR	ARG	LEU	SER	PHE	GLN
7	THR	SER	MET	HIS	ARG	LEU	GLY	ALA	SER	VAL
8	VAL	GLY	PHE	SER	ASP	SER	ALA	ASN	THR	SER
9	LEU	GLY	LYS	LYS	GLY	GLU	THR	LEU	ALA	ASP
10	THR	ILE	SER	VAL	ILE	SER	THR	TYR	VAL	ASP
11	ALA	ILE	VAL	MET	ARG	HIS	PRO	GLN	GLU	GLY
12	ALA	ALA	ARG	LEU	ALA	THR	GLU	PHE	SER	GLY
13	ASN	VAL	PRO	VAL	LEU	ASN	ALA	GLY	ASP	GLY
14	SER	ASN	GLN	HIS	PRO	THR	GLN	THR	LEU	LEU
15	ASP	LEU	PHE	THR	ILE	GLN	GLN	THR	GLU	GLY
16	ARG	LEU	ASP	ASN	LEU	HIS	VAL	ALA	MET	VAL
17	GLY	ASP	LEU	LYS	TYR	GLY	ARG	THR	VAL	HIS
18	SER	LEU	THR	GLN	ALA	LEU	ALA	LYS	PHE	ASP
19	GLY	ASN	ARG	PHE	TYR	PHE	ILE	ALA	PRO	ASP
20	ALA	LEU	ALA	MET	PRO	GLU	TYR	ILE	LEU	ASP
21	MET	LEU	ASP	GLU	LYS	GLY	ILE	ALA	TRP	SER
22	LEU	HIS	SER	SER	ILE	GLU	GLU	VAL	MET	ALA
23	GLU	VAL	ASP	ILE	LEU	TYR	MET	THR	ARG	VAL
24	GLN	LYS	GLU	ARG	LEU	ASP	PRO	SER	GLU	TYR
25	ALA	ASN	VAL	LYS	ALA	GLN	PHE	VAL	LEU	ARG
26	ALA	SER	ASP	LEU	HIS	ASN	ALA	LYS	ALA	ASN
27	MET	LYS	VAL	LEU	HIS	PRO	LEU	PRO	ARG	VAL
28	ASP	GLU	ILE	ALA	THR	ASP	VAL	ASP	LYS	THR
29	PRO	HIS	ALA	TRP	TYR	PHE	GLN	GLN	ALA	GLY
30	ASN	GLY	ILE	PHE	ALA	ARG	GLN	ALA	LEU	LEU
31	ALA	LEU	VAL	LEU	ASN	ARG	ASP	LEU	VAL	LEU