BMRB Entry 21058
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR21058
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Citation: Shin, Areum; Lee, Eunjung; Jeon, Dasom; Park, Young-Guen; Bang, Jeong Kyu; Park, Yong-Sun; Shin, Song Yub; Kim, Yangmee. "Peptoid-Substituted Hybrid Antimicrobial Peptide Derived from Papiliocin and Magainin 2 with Enhanced Bacterial Selectivity and Anti-inflammatory Activity." Biochemistry 54, 3921-3931 (2015).
PubMed: 26053120
Assembly members:
Papiliocin(1-8)-MAGAININ_2_HYBRID_PEPTIDE_ANALOGUE, polymer, 19 residues, Formula weight is not available
Natural source: Common Name: African clawed frog Taxonomy ID: 8355 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Xenopus laevis
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Papiliocin(1-8)-MAGAININ_2_HYBRID_PEPTIDE_ANALOGUE: RWKIFKKIPKFLHSAKKFX
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 151 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | PapMA | 1 |
Entities:
Entity 1, PapMA 19 residues - Formula weight is not available
| 1 | ARG | TRP | LYS | ILE | PHE | LYS | LYS | ILE | PRO | LYS | ||||
| 2 | PHE | LEU | HIS | SER | ALA | LYS | LYS | PHE | NH2 |
Samples:
sample_1: PapMA peptide 1 mM; DPC micelles, [U-99% 2H], 150 mM; H2O 90%; D2O, U-2H, 10%
sample_conditions_1: pH: 5.4; pressure: 1 atm; temperature: 303 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D 1H-1H NOESY | sample_1 | isotropic | sample_conditions_1 |
| 2D 1H-1H TOCSY | sample_1 | isotropic | sample_conditions_1 |
| 2D DQF-COSY | sample_1 | isotropic | sample_conditions_1 |
Software:
X-PLOR v3.851, BRUNGER - structure solution
NMR spectrometers:
- Bruker Avance 500 MHz