BMRB Entry 1996

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR1996

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR Study of the Phosphate-Binding Elements of Escherichia coli Elongation Factor Tu Catalytic Domain

Deposition date:

1995-07-31

Original release date:

1995-07-31

Authors:

Lowry, David; Cool, Robert; Redfield, Alfred; Parmeggiani, Andrea

Citation:

Citation: Lowry, David; Cool, Robert; Redfield, Alfred; Parmeggiani, Andrea. "NMR Study of the Phosphate-Binding Elements of Escherichia coli Elongation Factor Tu Catalytic Domain" Biochemistry 30, 10872-10877 (1991).

Assembly members:

Assembly members:
elongation factor Tu, polymer, 200 residues, Formula weight is not available

Natural source:

Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Eubacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source:

Experimental source: Production method: not available Host organism: Escherichia coli

Entity Sequences (FASTA):

Entity Sequences (FASTA):
elongation factor Tu: SKEKFERTKPHVNVGTIGHV DHGKTTLTAAITTVLAKTYG GAARAFDQIDNAPEEKARGI TINTSHVEYDTPTRHYAHVD CPGGADYVKNMITGAAQMDG AILVVAATDGPMPQTREHIL LGRQVGVPYIIVFLNKCDMV DDEELLELVEMEVRELLSQY DFPGDDTPIVRGSALKALEG DAEWEAKILELAGFLDSYIP

Data sets:

assigned_chemical_shifts
- chemical_shift_assignment_data_set_one

Data type	Count
15N chemical shifts	4
1H chemical shifts	4

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	elongation factor Tu	1

Entities:

Entity 1, elongation factor Tu 200 residues - Formula weight is not available

1	SER	LYS	GLU	LYS	PHE	GLU	ARG	THR	LYS	PRO
2	HIS	VAL	ASN	VAL	GLY	THR	ILE	GLY	HIS	VAL
3	ASP	HIS	GLY	LYS	THR	THR	LEU	THR	ALA	ALA
4	ILE	THR	THR	VAL	LEU	ALA	LYS	THR	TYR	GLY
5	GLY	ALA	ALA	ARG	ALA	PHE	ASP	GLN	ILE	ASP
6	ASN	ALA	PRO	GLU	GLU	LYS	ALA	ARG	GLY	ILE
7	THR	ILE	ASN	THR	SER	HIS	VAL	GLU	TYR	ASP
8	THR	PRO	THR	ARG	HIS	TYR	ALA	HIS	VAL	ASP
9	CYS	PRO	GLY	GLY	ALA	ASP	TYR	VAL	LYS	ASN
10	MET	ILE	THR	GLY	ALA	ALA	GLN	MET	ASP	GLY
11	ALA	ILE	LEU	VAL	VAL	ALA	ALA	THR	ASP	GLY
12	PRO	MET	PRO	GLN	THR	ARG	GLU	HIS	ILE	LEU
13	LEU	GLY	ARG	GLN	VAL	GLY	VAL	PRO	TYR	ILE
14	ILE	VAL	PHE	LEU	ASN	LYS	CYS	ASP	MET	VAL
15	ASP	ASP	GLU	GLU	LEU	LEU	GLU	LEU	VAL	GLU
16	MET	GLU	VAL	ARG	GLU	LEU	LEU	SER	GLN	TYR
17	ASP	PHE	PRO	GLY	ASP	ASP	THR	PRO	ILE	VAL
18	ARG	GLY	SER	ALA	LEU	LYS	ALA	LEU	GLU	GLY
19	ASP	ALA	GLU	TRP	GLU	ALA	LYS	ILE	LEU	GLU
20	LEU	ALA	GLY	PHE	LEU	ASP	SER	TYR	ILE	PRO

Samples:

sample_one:

sample_condition_set_one: pH: 7.6 na; temperature: 290 K

Experiments:

Name	Sample	Sample state	Sample conditions
not available	sample_one	not available	sample_condition_set_one

Software:

No software information available

NMR spectrometers:

unknown unknown 0 MHz

BMRB	1995
PDB	1D8T 1DG1 1EFC 1EFU 1ETU 1LS2 1OB2 1QZD 2BVN 2FX3 2HCJ 2HDN 3AGP 3AGQ 3AVT 3AVU 3AVV 3AVW 3AVX 3AVY 3EP2 3EQ3 3EQ4 3FIH 3IZV 3IZW 3MMP 3U2Q 3U6B 3U6K 3VNU 3VNV 4FWT 4G5G 4P3Y 4PC1 4PC2 4PC3 4PC6 4PC7 4Q7J 4R71
DBJ	BAB37613 BAB38326 BAE77340 BAE77952 BAG79124
EMBL	CAA38912 CAA38913 CAA40370 CAD08168 CAD09494
GB	AAA24669 AAA50993 AAA58136 AAC43078 AAC76364
PIR	AD0934 AD1005 D86089 F91152
PRF	0803214A
REF	NP_312217 NP_312930 NP_417798 NP_418407 NP_457924
SP	A1AGM6 A1AIF3 A6TEX7 A7MKI5 A7ZSL4
AlphaFold	A6TEX7 A7MKI5 A7ZSL4 A1AIF3 A1AGM6

1	SER	LYS	GLU	LYS	PHE	GLU	ARG	THR	LYS	PRO
2	HIS	VAL	ASN	VAL	GLY	THR	ILE	GLY	HIS	VAL
3	ASP	HIS	GLY	LYS	THR	THR	LEU	THR	ALA	ALA
4	ILE	THR	THR	VAL	LEU	ALA	LYS	THR	TYR	GLY
5	GLY	ALA	ALA	ARG	ALA	PHE	ASP	GLN	ILE	ASP
6	ASN	ALA	PRO	GLU	GLU	LYS	ALA	ARG	GLY	ILE
7	THR	ILE	ASN	THR	SER	HIS	VAL	GLU	TYR	ASP
8	THR	PRO	THR	ARG	HIS	TYR	ALA	HIS	VAL	ASP
9	CYS	PRO	GLY	GLY	ALA	ASP	TYR	VAL	LYS	ASN
10	MET	ILE	THR	GLY	ALA	ALA	GLN	MET	ASP	GLY
11	ALA	ILE	LEU	VAL	VAL	ALA	ALA	THR	ASP	GLY
12	PRO	MET	PRO	GLN	THR	ARG	GLU	HIS	ILE	LEU
13	LEU	GLY	ARG	GLN	VAL	GLY	VAL	PRO	TYR	ILE
14	ILE	VAL	PHE	LEU	ASN	LYS	CYS	ASP	MET	VAL
15	ASP	ASP	GLU	GLU	LEU	LEU	GLU	LEU	VAL	GLU
16	MET	GLU	VAL	ARG	GLU	LEU	LEU	SER	GLN	TYR
17	ASP	PHE	PRO	GLY	ASP	ASP	THR	PRO	ILE	VAL
18	ARG	GLY	SER	ALA	LEU	LYS	ALA	LEU	GLU	GLY
19	ASP	ALA	GLU	TRP	GLU	ALA	LYS	ILE	LEU	GLU
20	LEU	ALA	GLY	PHE	LEU	ASP	SER	TYR	ILE	PRO

1	SER	LYS	GLU	LYS	PHE	GLU	ARG	THR	LYS	PRO
2	HIS	VAL	ASN	VAL	GLY	THR	ILE	GLY	HIS	VAL
3	ASP	HIS	GLY	LYS	THR	THR	LEU	THR	ALA	ALA
4	ILE	THR	THR	VAL	LEU	ALA	LYS	THR	TYR	GLY
5	GLY	ALA	ALA	ARG	ALA	PHE	ASP	GLN	ILE	ASP
6	ASN	ALA	PRO	GLU	GLU	LYS	ALA	ARG	GLY	ILE
7	THR	ILE	ASN	THR	SER	HIS	VAL	GLU	TYR	ASP
8	THR	PRO	THR	ARG	HIS	TYR	ALA	HIS	VAL	ASP
9	CYS	PRO	GLY	GLY	ALA	ASP	TYR	VAL	LYS	ASN
10	MET	ILE	THR	GLY	ALA	ALA	GLN	MET	ASP	GLY
11	ALA	ILE	LEU	VAL	VAL	ALA	ALA	THR	ASP	GLY
12	PRO	MET	PRO	GLN	THR	ARG	GLU	HIS	ILE	LEU
13	LEU	GLY	ARG	GLN	VAL	GLY	VAL	PRO	TYR	ILE
14	ILE	VAL	PHE	LEU	ASN	LYS	CYS	ASP	MET	VAL
15	ASP	ASP	GLU	GLU	LEU	LEU	GLU	LEU	VAL	GLU
16	MET	GLU	VAL	ARG	GLU	LEU	LEU	SER	GLN	TYR
17	ASP	PHE	PRO	GLY	ASP	ASP	THR	PRO	ILE	VAL
18	ARG	GLY	SER	ALA	LEU	LYS	ALA	LEU	GLU	GLY
19	ASP	ALA	GLU	TRP	GLU	ALA	LYS	ILE	LEU	GLU
20	LEU	ALA	GLY	PHE	LEU	ASP	SER	TYR	ILE	PRO