BMRB Entry 19818

Name: Murine Neuroglobin, Fe3+ form (metNgB)
Published: 2015-03-05

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR19818

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Murine Neuroglobin, Fe3+ form (metNgB)

Deposition date:

2014-02-26

Original release date:

2015-03-05

Authors:

Yang, Yin Shan; Allemand, Frederic; Guca, Ewelina; Vallone, Beatrice; Delbecq, Stephane; Roumestand, Christian

Citation:

Citation: Yang, Yin Shan; Allemand, Frederic; Guca, Ewelina; Vallone, Beatrice; Delbecq, Stephane; Roumestand, Christian. "1H, 15N and 13C Backbone resonance assignments of murine met-Neuroglobin, free and in complex with cyanide." Biomol. NMR Assignments ., .-..

Assembly members:

Assembly members:
metNgb, polymer, 151 residues, Formula weight is not available

Natural source:

Natural source: Common Name: House mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET15b-tev

Entity Sequences (FASTA):

Entity Sequences (FASTA):
metNgb: MERPESELIRQSWRVVSRSP LEHGTVLFARLFALEPSLLP LFQYNGRQFSSPEDSLSSPE FLDHIRKVMLVIDAAVTNVE DLSSLEEYLTSLGRKHRAVG VRLSSFSTVGESLLYMLEKS LGPDFTPATRTAWSRLYGAV VQAMSRGWDGE

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1
- assigned_chem_shift_list_2

Data type	Count
13C chemical shifts	853
15N chemical shifts	280
1H chemical shifts	598

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	metNgb	1

Entities:

Entity 1, metNgb 151 residues - Formula weight is not available

1

MET

GLU

ARG

PRO

GLU

SER

GLU

LEU

ILE

ARG

2

GLN

SER

TRP

ARG

VAL

SER

ARG

SER

PRO

3

LEU

GLU

HIS

GLY

THR

VAL

LEU

PHE

ALA

ARG

4

LEU

PHE

ALA

LEU

GLU

PRO

SER

LEU

PRO

5

LEU

PHE

GLN

TYR

ASN

GLY

ARG

GLN

PHE

SER

6

SER

PRO

GLU

ASP

SER

LEU

SER

PRO

GLU

7

PHE

LEU

ASP

HIS

ILE

ARG

LYS

VAL

MET

LEU

8

VAL

ILE

ASP

ALA

VAL

THR

ASN

VAL

GLU

9

ASP

LEU

SER

LEU

GLU

TYR

LEU

THR

10

SER

LEU

GLY

ARG

LYS

HIS

ARG

ALA

VAL

GLY

11

VAL

ARG

LEU

SER

PHE

SER

THR

VAL

GLY

12

GLU

SER

LEU

TYR

MET

LEU

GLU

LYS

SER

13

LEU

GLY

PRO

ASP

PHE

THR

PRO

ALA

THR

ARG

14

THR

ALA

TRP

SER

ARG

LEU

TYR

GLY

ALA

VAL

15

VAL

GLN

ALA

MET

SER

ARG

GLY

TRP

ASP

GLY

16

GLU

Samples:

sample_1: metNgb, [U-100% 13C; U-100% 15N], 0.5 mM; Tris, HCl 50 mM; D2O 10%; H2O 90%; PMSF 0.05 mM; DSS 0.05 mM

sample_conditions_1: pH: 7.0; pressure: ambient atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO	sample_1	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1

Software:

TOPSPIN, Bruker Biospin - collection

NMR spectrometers:

Bruker Avance 700 MHz
Bruker Avance 700 MHz
Bruker Avance 700 MHz
Bruker Avance 700 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks