BMRB Entry 19625

Name: TNPX
Published: 2014-11-24

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PDB ID: 2mhc
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR19625
MolProbity Validation Chart

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

TNPX

Deposition date:

2013-11-20

Original release date:

2014-11-24

Authors:

Headey, S.; Sivakumaran, A.; Adams, V.; Rodgers, A.; Rood, J.; Scanlon, M.; Wilce, M.

Citation:

Citation: Headey, S.; Sivakumaran, A.; Adams, V.; Rodgers, A.; Scanlon, J.; Wilce, M.. "Solution Structure and DNA Binding of the Catalytic of the Large Serine Resolvase Tnpx" To be Published ., .-..

Assembly members:

Assembly members:
TNPX, polymer, 120 residues, 13793.345 Da.

Natural source:

Natural source: Common Name: firmicutes Taxonomy ID: 1502 Superkingdom: Bacteria Kingdom: not available Genus/species: CLOSTRIDIUM PERFRINGENS

Experimental source:

Experimental source: Production method: recombinant technology Host organism: ESCHERICHIA COLI Vector: PGEX4T2

Entity Sequences (FASTA):

Entity Sequences (FASTA):
TNPX: GSRTSRITALYERLSRDDDL TGESNSITNQKKYLEDYARR NGFENIRHFTDDGFSGVNFN RPGFQSLIKEVEAGNVETLI VKDMSRLGRNYLQVGFYTEV LFPQKNVRFLAINNSIDSNN

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	494
15N chemical shifts	130
1H chemical shifts	824

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	TNPX	1

Entities:

Entity 1, TNPX 120 residues - 13793.345 Da.

1	GLY	SER	ARG	THR	SER	ARG	ILE	THR	ALA	LEU
2	TYR	GLU	ARG	LEU	SER	ARG	ASP	ASP	ASP	LEU
3	THR	GLY	GLU	SER	ASN	SER	ILE	THR	ASN	GLN
4	LYS	LYS	TYR	LEU	GLU	ASP	TYR	ALA	ARG	ARG
5	ASN	GLY	PHE	GLU	ASN	ILE	ARG	HIS	PHE	THR
6	ASP	ASP	GLY	PHE	SER	GLY	VAL	ASN	PHE	ASN
7	ARG	PRO	GLY	PHE	GLN	SER	LEU	ILE	LYS	GLU
8	VAL	GLU	ALA	GLY	ASN	VAL	GLU	THR	LEU	ILE
9	VAL	LYS	ASP	MET	SER	ARG	LEU	GLY	ARG	ASN
10	TYR	LEU	GLN	VAL	GLY	PHE	TYR	THR	GLU	VAL
11	LEU	PHE	PRO	GLN	LYS	ASN	VAL	ARG	PHE	LEU
12	ALA	ILE	ASN	ASN	SER	ILE	ASP	SER	ASN	ASN

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO 3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D (H)C(CO)NH	sample_1	isotropic	sample_conditions_1
3D HC(C)H-TOCSY	sample_1	isotropic	sample_conditions_1
2D (HB)CB(CGCD)HD	sample_1	isotropic	sample_conditions_1
3D (H)CCH-TOCSY 2D (HB)CB(CGCDCE)HE	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1 NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-15N NOE	sample_1	isotropic	sample_conditions_1

PDB	2MHC
EMBL	CUP39613 CUQ38785
GB	AAB51419 EEA83356 EEF93031 ENZ31332 EQJ53319
REF	WP_002570991 WP_004611674 WP_006506523

BMRB Entry 19625

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	SER	ARG	THR	SER	ARG	ILE	THR	ALA	LEU
2	TYR	GLU	ARG	LEU	SER	ARG	ASP	ASP	ASP	LEU
3	THR	GLY	GLU	SER	ASN	SER	ILE	THR	ASN	GLN
4	LYS	LYS	TYR	LEU	GLU	ASP	TYR	ALA	ARG	ARG
5	ASN	GLY	PHE	GLU	ASN	ILE	ARG	HIS	PHE	THR
6	ASP	ASP	GLY	PHE	SER	GLY	VAL	ASN	PHE	ASN
7	ARG	PRO	GLY	PHE	GLN	SER	LEU	ILE	LYS	GLU
8	VAL	GLU	ALA	GLY	ASN	VAL	GLU	THR	LEU	ILE
9	VAL	LYS	ASP	MET	SER	ARG	LEU	GLY	ARG	ASN
10	TYR	LEU	GLN	VAL	GLY	PHE	TYR	THR	GLU	VAL
11	LEU	PHE	PRO	GLN	LYS	ASN	VAL	ARG	PHE	LEU
12	ALA	ILE	ASN	ASN	SER	ILE	ASP	SER	ASN	ASN

1	GLY	SER	ARG	THR	SER	ARG	ILE	THR	ALA	LEU
2	TYR	GLU	ARG	LEU	SER	ARG	ASP	ASP	ASP	LEU
3	THR	GLY	GLU	SER	ASN	SER	ILE	THR	ASN	GLN
4	LYS	LYS	TYR	LEU	GLU	ASP	TYR	ALA	ARG	ARG
5	ASN	GLY	PHE	GLU	ASN	ILE	ARG	HIS	PHE	THR
6	ASP	ASP	GLY	PHE	SER	GLY	VAL	ASN	PHE	ASN
7	ARG	PRO	GLY	PHE	GLN	SER	LEU	ILE	LYS	GLU
8	VAL	GLU	ALA	GLY	ASN	VAL	GLU	THR	LEU	ILE
9	VAL	LYS	ASP	MET	SER	ARG	LEU	GLY	ARG	ASN
10	TYR	LEU	GLN	VAL	GLY	PHE	TYR	THR	GLU	VAL
11	LEU	PHE	PRO	GLN	LYS	ASN	VAL	ARG	PHE	LEU
12	ALA	ILE	ASN	ASN	SER	ILE	ASP	SER	ASN	ASN

1	GLY	SER	ARG	THR	SER	ARG	ILE	THR	ALA	LEU
2	TYR	GLU	ARG	LEU	SER	ARG	ASP	ASP	ASP	LEU
3	THR	GLY	GLU	SER	ASN	SER	ILE	THR	ASN	GLN
4	LYS	LYS	TYR	LEU	GLU	ASP	TYR	ALA	ARG	ARG
5	ASN	GLY	PHE	GLU	ASN	ILE	ARG	HIS	PHE	THR
6	ASP	ASP	GLY	PHE	SER	GLY	VAL	ASN	PHE	ASN
7	ARG	PRO	GLY	PHE	GLN	SER	LEU	ILE	LYS	GLU
8	VAL	GLU	ALA	GLY	ASN	VAL	GLU	THR	LEU	ILE
9	VAL	LYS	ASP	MET	SER	ARG	LEU	GLY	ARG	ASN
10	TYR	LEU	GLN	VAL	GLY	PHE	TYR	THR	GLU	VAL
11	LEU	PHE	PRO	GLN	LYS	ASN	VAL	ARG	PHE	LEU
12	ALA	ILE	ASN	ASN	SER	ILE	ASP	SER	ASN	ASN