BMRB Entry 19609

Title:
Solution Structure of Protein-RNA Ternary Complex
Deposition date:
2013-11-12
Original release date:
2014-08-11
Authors:
Takahashi, Mari; Kuwasako, Kanako; Unzai, Satoru; Tsuda, Kengo; Yoshikawa, Seiko; He, Fahu; Kobayashi, Naohiro; Guntert, Peter; Shirouzu, Mikako; Ito, Takuhiro; Tanaka, Akiko; Yokoyama, Shigeyuki; Hagiwara, Masatoshi; Kuroyanagi, Hidehito; Muto, Yutaka
Citation:

Citation: Kuwasako, Kanako; Takahashi, Mari; Unzai, Satoru; Tsuda, Kengo; Yoshikawa, Seiko; He, Fahu; Kobayashi, Naohiro; Guntert, Peter; Shirouzu, Mikako; Ito, Takuhiro; Tanaka, Akiko; Yokoyama, Shigeyuki; Hagiwara, Masatoshi; Kuroyanagi, Hidehito; Muto, Yutaka. "Solution Structure of Protein-RNA Ternary Complex"  .

Assembly members:

Assembly members:
entity_1, polymer, 94 residues, 10588.121 Da.
entity_2, polymer, 105 residues, 11611.109 Da.
RNA, polymer, 12 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: nematode   Taxonomy ID: 6239   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Caenorhabditis elegans

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pGEX6p-1

Data sets:
Data typeCount
13C chemical shifts575
15N chemical shifts184
1H chemical shifts1157

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1entity_11
2entity_22
3RNA3

Entities:

Entity 1, entity_1 94 residues - 10588.121 Da.

1   GLYASPGLYPROARGARGLEUHISVALSER
2   ASNILEPROPHELYSTYRARGGLUPROASP
3   LEUTHRALAMETPHEGLULYSVALGLYPRO
4   VALVALASPVALGLUILEILEPHEASNGLU
5   ARGGLYSERLYSGLYPHEGLYPHEVALTHR
6   METGLNASNPROASPASPALAASPARGALA
7   ARGALAGLUPHEASNGLYTHRTHRILEGLU
8   GLYARGARGVALGLUVALASNLEUALATHR
9   GLNARGVALHISASNLYSLYSALALYSPRO
10   LEUMETSERVAL

Entity 2, entity_2 105 residues - 11611.109 Da.

1   GLYSERTHRASNALAGLUPROVALVALGLY
2   SERARGASPTHRMETPHETHRLYSILEPHE
3   VALGLYGLYLEUPROTYRHISTHRSERASP
4   LYSTHRLEUHISGLUTYRPHEGLUGLNPHE
5   GLYASPILEGLUGLUALAVALVALILETHR
6   ASPARGASNTHRGLNLYSSERARGGLYTYR
7   GLYPHEVALTHRMETLYSASPARGALASER
8   ALAGLUARGALACYSLYSASPPROASNPRO
9   ILEILEASPGLYARGLYSALAASNVALASN
10   LEUALATYRLEUGLYALALYSPROARGTHR
11   ASNVALGLNLEUALA

Entity 3, RNA 12 residues - Formula weight is not available

1   UGCAUGGUGU
2   GC

Related Database Links:

BMRB 19680 19686 11541 18845 18846 19653
PDB 2MGZ 2RU3 4CH0 4CH1 4CIO
EMBL CAA85276 CAD82915 CCU83325 CCD71425 CCD71429
GB ABF22491 EFO82252 EGT29982 ETN82682 KHJ75674 KIH66793
REF NP_001293646 NP_497841 NP_871667 NP_001129938 NP_508674 XP_003117654 XP_006219866

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks