BMRB Entry 19057

Title:
brevinin-2-related peptide, an antimicrobial peptide derived from frog skin   PubMed: 25044683
Deposition date:
2013-02-27
Original release date:
2014-09-19
Authors:
Chatterjee, Chiradip
Citation:

Citation: Bandyopadhyay, Susmita; Ng, Boon Yee; Chong, Charmaine; Lim, Ming Zhen; Gill, Sonia Kiran; Lee, Ke Hui; Sivaraman, J.; Chatterjee, Chiradip. "Micelle bound structure and DNA interaction of brevinin-2-related peptide, an antimicrobial peptide derived from frog skin."  J. Pept. Sci. 20, 811-821 (2014).

Assembly members:

Assembly members:
svensds, polymer, 21 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: mink frog   Taxonomy ID: 190274   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Rana septentrionalis

Experimental source:   Production method: chemical synthesis   Host organism: Chemical synthesis

Experimental source:

Natural source:   Common Name: mink frog   Taxonomy ID: 190274   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Rana septentrionalis

Experimental source:   Production method: chemical synthesis   Host organism: Chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
svensds: GIWDTIKSMGKVFAGKTLQN L

Data sets:
Data typeCount
1H chemical shifts135

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1amino acids1

Entities:

Entity 1, amino acids 21 residues - Formula weight is not available

1   GLYILETRPASPTHRILELYSSERMETGLY
2   LYSVALPHEALAGLYLYSTHRLEUGLNASN
3   LEU

Samples:

sample_1: svensds 2 mM; SDS, [U-100% 2H], 100 mM; DPC, [U-100% 2H], 100 mM; D2O 10%; H2O 90%

sample_conditions_1: ionic strength: 1 M; pH: 4.5; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_1isotropicsample_conditions_1

Software:

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

  • Bruker DRX 800 MHz
  • Bruker DRX 400 MHz