BMRB Entry 19055

Name: ns5a D2 con1
Published: 2017-01-30

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR19055

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

ns5a D2 con1

Deposition date:

2013-02-26

Original release date:

2017-01-30

Authors:

Badillo, Aurelie; Penin, Francois

Citation:

Citation: Badillo, Aurelie; Hanoulle, Xavier; Penin, Francois. "ns5a D2 con1" Biochemistry ., .-..

Assembly members:

Assembly members:
ns5a_d2_con1, polymer, 96 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Hepatitis C virus Taxonomy ID: 11103 Superkingdom: Viruses Kingdom: not available Genus/species: Hepacivirus not available

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pt7-7

Entity Sequences (FASTA):

Entity Sequences (FASTA):
ns5a_d2_con1: DSPDADLIEANLLWRQEMGG NITRVESENKVVILDSFEPL QAEEDEREVSVPAEILRRSR KFPRAMPIWARPDYNPPLLE SWKDPDYVPPVVHGLQ

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	285
15N chemical shifts	85
1H chemical shifts	85

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	ns5a d2 con1	1

Entities:

Entity 1, ns5a d2 con1 96 residues - Formula weight is not available

1

ASP

SER

PRO

ASP

ALA

ASP

LEU

ILE

GLU

ALA

2

ASN

LEU

TRP

ARG

GLN

GLU

MET

GLY

3

ASN

ILE

THR

ARG

VAL

GLU

SER

GLU

ASN

LYS

4

VAL

ILE

LEU

ASP

SER

PHE

GLU

PRO

LEU

5

GLN

ALA

GLU

ASP

GLU

ARG

GLU

VAL

SER

6

VAL

PRO

ALA

GLU

ILE

LEU

ARG

SER

ARG

7

LYS

PHE

PRO

ARG

ALA

MET

PRO

ILE

TRP

ALA

8

ARG

PRO

ASP

TYR

ASN

PRO

LEU

GLU

9

SER

TRP

LYS

ASP

PRO

ASP

TYR

VAL

PRO

10

VAL

HIS

GLY

LEU

GLN

Samples:

sample_1: ns5a d2 con1, [U-100% 13C; U-100% 15N], 0.5 ± 0.1 mM; H2O 95 ± 0.1 %; D2O 5 ± 0.1 %

sample_conditions_1: ionic strength: 50 mM; pH: 6.8; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1

Software:

TOPSPIN v2.1, Bruker Biospin - collection

NMR spectrometers:

Bruker Avance 600 MHz

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks