BMRB Entry 18915

Name: Brevenin DPC micelle bound structure
Published: 2019-08-30

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR18915

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Brevenin DPC micelle bound structure

Deposition date:

2012-12-21

Original release date:

2019-08-30

Authors:

Chatterjee, Chiradip

Citation:

Citation: Bandyopadhyay, Susmita; Ng, Boon Yee; Chong, Charmaine; Lim, Ming Zhen; Gill, Sonia Kiran; Lee, Ke Hui; Sivaraman, J; Chatterjee, Chiradip. "Micelle bound structure and DNA interaction of brevinin-2-related peptide, an antimicrobial peptide derived from frog skin" J. Pept. Sci. 20, 811-821 (2014).
PubMed: 25044683

Assembly members:

Assembly members:
Peptide, polymer, 21 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Frogs Taxonomy ID: 8342 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Anura Frog

Experimental source:

Experimental source: Production method: obtained from a vendor

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Peptide: GIWDTIKSMGKVFAGKILQN L

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1
spectral_peak_list
- spectral_peak_list_1

Data type	Count
1H chemical shifts	145

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Brevenin	1

Entities:

Entity 1, Brevenin 21 residues - Formula weight is not available

1

GLY

ILE

TRP

ASP

THR

ILE

LYS

SER

MET

GLY

2

LYS

VAL

PHE

ALA

GLY

LYS

ILE

LEU

GLN

ASN

3

LEU

Samples:

sample_1: Brevenin 2 mM; Lipid, [U-2H], 2 mM

sample_conditions_1: temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1

Software:

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

Bruker DRX 800 MHz
Bruker DRX 400 MHz