BMRB Entry 18331

Name: 1H, 13C and 15N assignments of the holo-acyl carrier protein of Pseudomonas aeruginosa
Published: 2012-09-14

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR18331

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

1H, 13C and 15N assignments of the holo-acyl carrier protein of Pseudomonas aeruginosa

Deposition date:

2012-03-15

Original release date:

2012-09-14

Authors:

Duggan, Brendan; Roca, Amancio; Zhang, Yong-Mei

Citation:

Citation: Duggan, Brendan; Roca, Amancio; Zhang, Yong-Mei. "1H, 13C and 15N assignments of the holo-acyl carrier protein of Pseudomonas aeruginosa." Biomol. NMR Assignments 7, 225-228 (2013).
PubMed: 22843382

Assembly members:

Assembly members:
PaAcpP, polymer, 81 residues, 9008.8515 Da.

Natural source:

Natural source: Common Name: Pseudomonas aeruginosa Taxonomy ID: 287 Superkingdom: Bacteria Kingdom: not available Genus/species: Pseudomonas aeruginosa

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET-14b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
PaAcpP: GSHMSTIEERVKKIVAEQLG VKEEEVTNSASFVEDLGADS LDTVELVMALEEEFETEIPD EKAEKITTVQEAIDYIVAHQ Q

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list

Data type	Count
13C chemical shifts	338
15N chemical shifts	83
1H chemical shifts	563

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	PaAcpP	1

Entities:

Entity 1, PaAcpP 81 residues - 9008.8515 Da.

1

GLY

SER

HIS

MET

SER

THR

ILE

GLU

ARG

2

VAL

LYS

ILE

VAL

ALA

GLU

GLN

LEU

GLY

3

VAL

LYS

GLU

VAL

THR

ASN

SER

ALA

4

SER

PHE

VAL

GLU

ASP

LEU

GLY

ALA

ASP

SER

5

LEU

ASP

THR

VAL

GLU

LEU

VAL

MET

ALA

LEU

6

GLU

PHE

GLU

THR

GLU

ILE

PRO

ASP

7

GLU

LYS

ALA

GLU

LYS

ILE

THR

VAL

GLN

8

GLU

ALA

ILE

ASP

TYR

ILE

VAL

ALA

HIS

GLN

9

GLN

Samples:

15N-labelled: PaAcpP, [U-99% 15N], 2.0 mM; sodium phosphate 50.0 mM; sodium chloride 50.0 mM; H2O 5%; D2O 95%

13C-15N-labelled: PaAcpP, [U-99% 13C; U-99% 15N], 2.0 mM; sodium phosphate 50.0 mM; sodium chloride 50.0 mM; H2O 5%; D2O 95%

13C-15N_D2O: PaAcpP, [U-99% 13C; U-99% 15N], 2.0 mM; sodium phosphate 50.0 mM; sodium chloride 50.0 mM; D2O 100%

CondSet1: ionic strength: 0.050 M; pH: 7.000; pressure: 1.000 atm; temperature: 298.000 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC/HMQC	15N-labelled	isotropic	CondSet1
3D HNCACB	13C-15N-labelled	isotropic	CondSet1
cbcaconh ({CA\|Cca}coNH)	13C-15N-labelled	isotropic	CondSet1
3D HNCO	13C-15N-labelled	isotropic	CondSet1
hCCconh (C_ccoNH.TOCSY)	13C-15N-labelled	isotropic	CondSet1
3D 1H-15N NOESY	15N-labelled	isotropic	CondSet1
3D H(CCO)NH	13C-15N-labelled	isotropic	CondSet1
2D 1H-13C HSQC/HMQC	13C-15N_D2O	isotropic	CondSet1
hbCBcgcdHD	13C-15N_D2O	isotropic	CondSet1
HMBC-HSQC	13C-15N_D2O	isotropic	CondSet1

Software:

ANALYSIS v2.1, CCPN - assignment

TALOS+, Shen Yang - secondary structure prediction

TOPSPIN v2.1, Bruker - acquisition

NMRPipe v2011, Frank Delaglio - processing

NMR spectrometers:

Bruker Avance 600 MHz

BMRB	18821
DBJ	BAK90915 BAP22431 BAP50057 BAQ38943 BAR67004
EMBL	CAW26824 CCQ85094 CDF85073 CDH70383 CDH76426
GB	AAB94392 AAG06354 ABJ12204 ABR81030 AEO74481
REF	NP_251656 WP_003091135 WP_007160597 WP_015477931
SP	O54439
AlphaFold	O54439