BMRB Entry 18192

Name: Solution structure of Sgf73(59-102) zinc finger domain
Published: 2012-03-23

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PDB ID: 2lo3
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18192
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution structure of Sgf73(59-102) zinc finger domain

Deposition date:

2012-01-10

Original release date:

2012-03-23

Authors:

Gao, Xiaojun; Koehler, Christian; Bonnet, Jacques; Devys, Didier; Kieffer, Bruno

Citation:

Citation: Koehler, Christian; Gao, Xiaojun; Bonnet, Jacques; Devys, Didier; Kieffer, Bruno. "Insights into the role of SGF11 and SGF73 for the interaction between SAGA and nucleosomes" .

Assembly members:

Assembly members:
sgf73, polymer, 44 residues, 9567.000 Da.
ZINC ION, non-polymer, 65.409 Da.

Natural source:

Natural source: Common Name: baker's yeast Taxonomy ID: 4932 Superkingdom: Eukaryota Kingdom: Fungi Genus/species: Saccharomyces cerevisiae

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGex4T1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
sgf73: NPNAQLIEDPLDKPIQYRVC EKCGKPLALTAIVDHLENHC AGAS

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1
heteronucl_NOEs
- heteronuclear_noe_list_1
heteronucl_T1_relaxation
- heteronuclear_T1_list_1
heteronucl_T2_relaxation
- heteronuclear_T2_list_1

Data type	Count
13C chemical shifts	175
15N chemical shifts	44
1H chemical shifts	270
heteronuclear NOE values	33
T1 relaxation values	33
T2 relaxation values	33

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	SGF73	1
2	ZINC ION	2

Entities:

Entity 1, SGF73 44 residues - 9567.000 Da.

1

ASN

PRO

ASN

ALA

GLN

LEU

ILE

GLU

ASP

PRO

2

LEU

ASP

LYS

PRO

ILE

GLN

TYR

ARG

VAL

CYS

3

GLU

LYS

CYS

GLY

LYS

PRO

LEU

ALA

LEU

THR

4

ALA

ILE

VAL

ASP

HIS

LEU

GLU

ASN

HIS

CYS

5

ALA

GLY

ALA

SER

Entity 2, ZINC ION - Zn - 65.409 Da.

1

ZN

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_2	isotropic	sample_conditions_1
2D 1H-1H COSY	sample_2	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_2	isotropic	sample_conditions_1
2D 1H-13C HSQC aliphatic	sample_3	isotropic	sample_conditions_2
3D CBCA(CO)NH	sample_3	isotropic	sample_conditions_2
3D HNCO	sample_3	isotropic	sample_conditions_2
3D HNCA	sample_3	isotropic	sample_conditions_2
3D HNCACB	sample_3	isotropic	sample_conditions_2
3D HCCH-TOCSY	sample_3	isotropic	sample_conditions_2
3D HNCACO	sample_3	isotropic	sample_conditions_2
3D HN(CO)CA	sample_3	isotropic	sample_conditions_2
2D 1H-1H NOESY	sample_3	isotropic	sample_conditions_2
2D 1H-15N HSQC R1 edited	sample_3	isotropic	sample_conditions_2
2D 1H-15N HSQC R2 edited	sample_3	isotropic	sample_conditions_2
2D 1H-15N heteronuclear NOE	sample_3	isotropic	sample_conditions_2

PDB	2LO3 3M99 3MHH 3MHS 4FIP 4FJC 4FK5 4W4U 4WA6
DBJ	GAA23323
EMBL	CAA96770 CAY79696
GB	AHY79310 AJP38728 AJR76048 AJR76549 AJR77046
REF	NP_011449
SP	P53165
TPG	DAA08036
AlphaFold	P53165

BMRB Entry 18192

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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