BMRB Entry 17889

Name: The polyserine tract of Nasonia vitripennis Vg residues 351-385
Published: 2012-05-22

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PDB ID: 2lid
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR17889
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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

The polyserine tract of Nasonia vitripennis Vg residues 351-385

Deposition date:

2011-08-29

Original release date:

2012-05-22

Authors:

Havukainen, Heli; Halskau, Oyvind

Citation:

Citation: Havukainen, Heli; Underhaug, Jarl; Wolschin, Florian; Amdam, Gro; Halskau, Oyvind. "A vitellogenin polyserine cleavage site: highly disordered conformation protected from proteolysis by phosphorylation." J. Exp. Biol. 215, 1837-1846 (2012).
PubMed: 22573762

Assembly members:

Assembly members:
NvVg, polymer, 35 residues, 4046.233 Da.

Natural source:

Natural source: Common Name: Jewel Wasp Taxonomy ID: 7425 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Nasonia vitripennis

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
NvVg: EHKHSDESTSESFESIADNN DDSYFQRKPKLTEAP

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
15N chemical shifts	37
1H chemical shifts	222

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	NvVg	1

Entities:

Entity 1, NvVg 35 residues - 4046.233 Da.

1

GLU

HIS

LYS

HIS

SER

ASP

GLU

SER

THR

SER

2

GLU

SER

PHE

GLU

SER

ILE

ALA

ASP

ASN

3

ASP

SER

TYR

PHE

GLN

ARG

LYS

PRO

LYS

4

LEU

THR

GLU

ALA

PRO

Samples:

sample_1: NvVg, [U-15N]-ILE, 20 w/v; sodium phosphate 50 mM; sodium azide 0.02%; H2O 95%; D2O 5%

sample_conditions_1: ionic strength: 0.06 M; pH: 6.7; pressure: 1 atm; temperature: 273 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1

Software:

ARIA v1.2, Linge, O'Donoghue and Nilges - structure solution

NMR spectrometers:

Bruker AV600 600 MHz

PDB	2LID
REF	XP_001607388