BMRB Entry 17617

Name: IIIS4
Published: 2011-06-03

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PDB ID: 2lcm
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR17617
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

IIIS4

Deposition date:

2011-05-02

Original release date:

2011-06-03

Authors:

Darbon, Herv; De waar, Michel

Citation:

Citation: Douzi, Badreddine; Darbon, Herve; De waar, Michel. "structure of S4-3 voltage sensor peptide" J. Biol. Chem. ., .-..

Assembly members:

Assembly members:
Peptide, polymer, 28 residues, 3351.292 Da.

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Peptide: KDINTIKSLRVLRVLRPLKT IKRLPKLK

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
1H chemical shifts	236

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	S4-3 voltage sensor peptide	1

Entities:

Entity 1, S4-3 voltage sensor peptide 28 residues - 3351.292 Da.

1

LYS

ASP

ILE

ASN

THR

ILE

LYS

SER

LEU

ARG

2

VAL

LEU

ARG

VAL

LEU

ARG

PRO

LEU

LYS

THR

3

ILE

LYS

ARG

LEU

PRO

LYS

LEU

LYS

Samples:

sample_1: Peptide 1 mM; D2O 10 mM; H2O 90 mM; Trifluoroethanol 30%

sample_conditions_1: pH: 4; pressure: 1 atm; temperature: 300 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D DQF-COSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1

Software:

CYANA v2.1, Guntert, Mumenthaler and Wuthrich - chemical shift calculation

NMR spectrometers:

Bruker Avance 600 MHz

PDB	2LCM
DBJ	BAA94765 BAA94766 BAB85611 BAB85612 BAD92704
EMBL	CAA40714 CAA40715 CAA40871 CAA40872 CAA68172
GB	AAA40806 AAA42014 AAA51897 AAA51898 AAB49674
PRF	1709354A 1709354B
REF	NP_000059 NP_000709 NP_001035993 NP_001068597 NP_001095163
SP	O00555 O55017 P27884 P54282 P56699
TPG	DAA28081
AlphaFold	O00555 O55017 P27884 P54282 P56699