BMRB Entry 17497

Name: SNX-17-PX-DOMAIN
Published: 2011-05-19

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR17497

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

SNX-17-PX-DOMAIN

Deposition date:

2011-02-28

Original release date:

2011-05-19

Authors:

Mobli, Mehdi; Ghai, Rajesh

Citation:

Citation: Ghai, Rajesh; Mobli, Mehdi; Norwood, Suzanne; Bugarcic, Andrea; Teasdale, Rohan; King, Glenn; Collins, Brett. "Phox homology band 4.1/ezrin/radixin/moesin-like proteins function as molecular scaffolds that interact with cargo receptors and Ras GTPases." Proc. Natl. Acad. Sci. U.S.A. 108, 7763-7768 (2011).
PubMed: 21512128

Assembly members:

Assembly members:
SNX17-PX, polymer, 112 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pGEX4T-2

Entity Sequences (FASTA):

Entity Sequences (FASTA):
SNX17-PX: NAMHFSIPETESRSGDSGGS AYVAYNIHVNGVLHCRVRYS QLLGLHEQLRKEYGANVLPA FPPKKLFSLTPAEVEQRREQ LEKYMQAVRQDPLLGSSETF NSFLRRAQQETQ

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	370
15N chemical shifts	105
1H chemical shifts	540

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	SNX17-PX	1

Entities:

Entity 1, SNX17-PX 112 residues - Formula weight is not available

1

ASN

ALA

MET

HIS

PHE

SER

ILE

PRO

GLU

THR

2

GLU

SER

ARG

SER

GLY

ASP

SER

GLY

SER

3

ALA

TYR

VAL

ALA

TYR

ASN

ILE

HIS

VAL

ASN

4

GLY

VAL

LEU

HIS

CYS

ARG

VAL

ARG

TYR

SER

5

GLN

LEU

GLY

LEU

HIS

GLU

GLN

LEU

ARG

6

LYS

GLU

TYR

GLY

ALA

ASN

VAL

LEU

PRO

ALA

7

PHE

PRO

LYS

LEU

PHE

SER

LEU

THR

8

PRO

ALA

GLU

VAL

GLU

GLN

ARG

GLU

GLN

9

LEU

GLU

LYS

TYR

MET

GLN

ALA

VAL

ARG

GLN

10

ASP

PRO

LEU

GLY

SER

GLU

THR

PHE

11

ASN

SER

PHE

LEU

ARG

ALA

GLN

GLU

12

THR

GLN

Samples:

sample_1: SNX17-PX, [U-100% 13C; U-100% 15N], 0.8 mM; D2O, [U-100% 2H], 5%; HEPES 10 mM; sodium chloride 100 mM; Lithium Sulphate 10 mM; DTT 2 mM; H2O, [U-100% 2H], 95%

sample_conditions_1: ionic strength: 100 mM; pH: 7; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1

Software:

XEASY, Bartels et al. - chemical shift assignment

Rowland NMR Toolkit, J. C. Hoch & A. S. Stern - processing

NMR spectrometers:

Bruker Avance 900 MHz

PDB	3FOG 3LUI
DBJ	BAA06542 BAC36927 BAC37004 BAD96263 BAE33663
EMBL	CAC12897 CAG33362 CAH93411
GB	AAH02524 AAH02610 AAH14620 AAH23732 AAH26571
REF	NP_001011981 NP_001015638 NP_001127002 NP_001252904 NP_001253990
SP	Q15036 Q5EA77 Q5R4A5 Q6AYS6 Q8BVL3
TPG	DAA24411
AlphaFold	Q15036 Q5EA77 Q5R4A5 Q6AYS6 Q8BVL3