BMRB Entry 17279

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PDB ID: 2l5p
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR17279
MolProbity Validation Chart

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Title:
Solution NMR structure of protein lipocalin 12 from rat epididymis
Deposition date:
2010-11-03
Original release date:
2011-05-05
Authors:
Peng, Yu; Lin, Donghai
Citation:

Citation: Peng, Yu; Zhang, Xu; Liu, Jiafu; Liu, Qiang; Guo, Chenyun; Zhang, Yonglian; Lin, Donghai. "Solution structure of the protein lipocalin 12 from rat epididymis."  Proteins 79, 2316-2320 (2011).
PubMed: 21538546

Assembly members:

Assembly members:
rat_epididymal_lipocalin_12, polymer, 184 residues, 20124.996 Da.

Natural source:

Natural source:   Common Name: Norway rat   Taxonomy ID: 10116   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Rattus norvegicus

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pET22b

Entity Sequences (FASTA):

Entity Sequences (FASTA):
rat_epididymal_lipocalin_12: MGQSPTMPQGFSQMTSFQSN KFQGEWFVLGLADNTYKREH RPLLHSFITLFKLRDNSEFQ VTNSMTRGKHCSTWSYTLIP TNKPGQFTRDNRGSGPGADK ENIQVIETDYVKFALVLSLR QASNQNITRVSLLGRDWKIT HKTIDRFIALTKTQNLTKNN LLFPDLTDWLLDPKVCLEHH HHHH

Data sets:
Data typeCount
13C chemical shifts728
15N chemical shifts182
1H chemical shifts1098

Additional metadata:

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  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1rat epididymal lipocalin 121

Entities:

Entity 1, rat epididymal lipocalin 12 184 residues - 20124.996 Da.

1   METGLYGLNSERPROTHRMETPROGLNGLY
2   PHESERGLNMETTHRSERPHEGLNSERASN
3   LYSPHEGLNGLYGLUTRPPHEVALLEUGLY
4   LEUALAASPASNTHRTYRLYSARGGLUHIS
5   ARGPROLEULEUHISSERPHEILETHRLEU
6   PHELYSLEUARGASPASNSERGLUPHEGLN
7   VALTHRASNSERMETTHRARGGLYLYSHIS
8   CYSSERTHRTRPSERTYRTHRLEUILEPRO
9   THRASNLYSPROGLYGLNPHETHRARGASP
10   ASNARGGLYSERGLYPROGLYALAASPLYS
11   GLUASNILEGLNVALILEGLUTHRASPTYR
12   VALLYSPHEALALEUVALLEUSERLEUARG
13   GLNALASERASNGLNASNILETHRARGVAL
14   SERLEULEUGLYARGASPTRPLYSILETHR
15   HISLYSTHRILEASPARGPHEILEALALEU
16   THRLYSTHRGLNASNLEUTHRLYSASNASN
17   LEULEUPHEPROASPLEUTHRASPTRPLEU
18   LEUASPPROLYSVALCYSLEUGLUHISHIS
19   HISHISHISHIS

Related Database Links:

PDB 2L5P
GB ABG24235 EDL93574
REF NP_001121610
SP B3EY83
AlphaFold B3EY83

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