BMRB Entry 17272

Click here to enlarge.

PDB ID: 2l5c
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR17272
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
XML gzip file.
RDF gzip file.
All files associated with the entry

Title:
Solution structures of human PIWI-like 1 PAZ domain
Deposition date:
2010-11-01
Original release date:
2011-04-08
Authors:
Zeng, Lei; Zhang, Qiang; Yan, Kelley; Zhou, Ming-Ming
Citation:

Citation: Zeng, Lei; Zhang, Qiang; Yan, Kelley; Zhou, Ming-Ming. "Structural insights into piRNA recognition by the human PIWI-like 1 PAZ domain."  Proteins 79, 2004-2009 (2011).
PubMed: 21465557

Assembly members:

Assembly members:
Human PIWI-like 1 PAZ domain, polymer, 134 residues, 15673.891 Da.

Natural source:

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pGEX 4T-1

Entity Sequences (FASTA):

Entity Sequences (FASTA):
Human PIWI-like 1 PAZ domain: CTDVSHKVLRSETVLDFMFN FYHQTEEHKFQEQVSKELIG LVVLTKYNNKTYRVDDIDWD QNPKSTFKKADGSEVSFLEY YRKQYNQEITDLKQPVLVSQ PKRRRGPGGTLPGPAMLIPE LCYLTGLTDKMRND

Data sets:
Data typeCount
13C chemical shifts456
15N chemical shifts138
1H chemical shifts878

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Human PIWI-like 1 PAZ domain1

Entities:

Entity 1, Human PIWI-like 1 PAZ domain 134 residues - 15673.891 Da.

1   CYSTHRASPVALSERHISLYSVALLEUARG
2   SERGLUTHRVALLEUASPPHEMETPHEASN
3   PHETYRHISGLNTHRGLUGLUHISLYSPHE
4   GLNGLUGLNVALSERLYSGLULEUILEGLY
5   LEUVALVALLEUTHRLYSTYRASNASNLYS
6   THRTYRARGVALASPASPILEASPTRPASP
7   GLNASNPROLYSSERTHRPHELYSLYSALA
8   ASPGLYSERGLUVALSERPHELEUGLUTYR
9   TYRARGLYSGLNTYRASNGLNGLUILETHR
10   ASPLEULYSGLNPROVALLEUVALSERGLN
11   PROLYSARGARGARGGLYPROGLYGLYTHR
12   LEUPROGLYPROALAMETLEUILEPROGLU
13   LEUCYSTYRLEUTHRGLYLEUTHRASPLYS
14   METARGASNASP

Related Database Links:

BMRB 17273
PDB 2L5C 2L5D 2XFM 3O3I 3O6E 3O7V
DBJ BAA93705 BAC04068 BAF49084
GB AAC97371 AAH28581 AAH66846 AAI29858 AAI29859
REF NP_001102323 NP_001177900 NP_001181902 NP_001182640 NP_001302505
SP Q96J94 Q9JMB7
AlphaFold Q96J94 Q9JMB7

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks