BMRB Entry 17141

Name: Backbone 1H, 13C, and 15N Chemical Shift Assignments for HYL1-dsRBD2
Published: 2010-09-28

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR17141

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Backbone 1H, 13C, and 15N Chemical Shift Assignments for HYL1-dsRBD2

Deposition date:

2010-08-22

Original release date:

2010-09-28

Authors:

Rasia, Rodolfo; Mateos, Julieta; Bologna, Nicolas; Burdisso, Paula; Imbert, Lionel; Palatnik, Javier; Boisbouvier, Jerome

Citation:

Citation: Rasia, Rodolfo; Mateos, Julieta; Bologna, Nicolas; Burdisso, Paula; Imbert, Lionel; Palatnik, Javier; Boisbouvier, Jerome. "Structure and RNA Interactions of the Plant MicroRNA Processing-Associated Protein HYL1." Biochemistry 49, 8237-8239 (2010).
PubMed: 20735118

Assembly members:

Assembly members:
hyl1-2, polymer, 77 residues, Formula weight is not available

Natural source:

Natural source: Common Name: thale cress Taxonomy ID: 3702 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Arabidopsis thaliana

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET-TEV

Entity Sequences (FASTA):

Entity Sequences (FASTA):
hyl1-2: GHMHETGLCKNLLQEYAQKM NYAIPLYQCQKVETLGRVTQ FTCTVEIGGIKYTGAATRTK KDAEISAGRTALLAIQS

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1
RDCs
- RDC_list_1

Data type	Count
13C chemical shifts	195
15N chemical shifts	63
1H chemical shifts	63
residual dipolar couplings	181

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	HYL1 second dsRBD	1

Entities:

Entity 1, HYL1 second dsRBD 77 residues - Formula weight is not available

1

GLY

HIS

MET

HIS

GLU

THR

GLY

LEU

CYS

LYS

2

ASN

LEU

GLN

GLU

TYR

ALA

GLN

LYS

MET

3

ASN

TYR

ALA

ILE

PRO

LEU

TYR

GLN

CYS

GLN

4

LYS

VAL

GLU

THR

LEU

GLY

ARG

VAL

THR

GLN

5

PHE

THR

CYS

THR

VAL

GLU

ILE

GLY

ILE

6

LYS

TYR

THR

GLY

ALA

THR

ARG

THR

LYS

7

LYS

ASP

ALA

GLU

ILE

SER

ALA

GLY

ARG

THR

8

ALA

LEU

ALA

ILE

GLN

SER

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1
3D HN(COCA)CB	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO	sample_1	isotropic	sample_conditions_1
3D HNCO JCACO	sample_1	isotropic	sample_conditions_1
3D HNCO JNH	sample_1	isotropic	sample_conditions_1
3D HNCOCA JCAHA	sample_1	isotropic	sample_conditions_1
3D HNCO JCACO	sample_aligned	anisotropic	sample_conditions_1
3D HNCO JNH	sample_aligned	anisotropic	sample_conditions_1
3D HNCOCA JCAHA	sample_aligned	anisotropic	sample_conditions_1

PDB	2L2M 3ADJ
DBJ	BAH57238
GB	AAB60726 AAG49890 AAK96822 AAM10087 AEE28481
REF	NP_563850
SP	O04492
AlphaFold	O04492

BMRB Entry 17141

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

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