BMRB Entry 17057

Title:
Interaction of fatty acid with myoglobin
Deposition date:
2010-07-13
Original release date:
2010-09-08
Authors:
Sriram, Renuka; Kreutzer, Ulrike; Shih, Lifan; Jue, Thomas
Citation:

Citation: Sriram, Renuka; Kreutzer, Ulrike; Shih, Lifan; Jue, Thomas. "Interaction of fatty acid with myoglobin"  FEBS Lett. 582, 3643-3649 (2008).
PubMed: 18840435

Assembly members:

Assembly members:
Mb, polymer, 154 residues, Formula weight is not available
PALMITIC ACID, non-polymer, 256.424 Da.
CYANIDE ION, non-polymer, 26.017 Da.

Natural source:

Natural source:   Common Name: Horse   Taxonomy ID: 9796   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Equus caballus

Experimental source:

Experimental source:   Production method: obtained from a vendor

Data sets:
  • binding_constants
Data typeCount
binding constants2

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Mb1
2PLM2
3CYN3

Entities:

Entity 1, Mb 154 residues - Formula weight is not available

1   METGLYLEUSERASPGLYGLUTRPGLNGLN
2   VALLEUASNVALTRPGLYLYSVALGLUALA
3   ASPILEALAGLYHISGLYGLNGLUVALLEU
4   ILEARGLEUPHETHRGLYHISPROGLUTHR
5   LEUGLULYSPHEASPLYSPHELYSHISLEU
6   LYSTHRGLUALAGLUMETLYSALASERGLU
7   ASPLEULYSLYSHISGLYTHRVALVALLEU
8   THRALALEUGLYGLYILELEULYSLYSLYS
9   GLYHISHISGLUALAGLULEULYSPROLEU
10   ALAGLNSERHISALATHRLYSHISLYSILE
11   PROILELYSTYRLEUGLUPHEILESERASP
12   ALAILEILEHISVALLEUHISSERLYSHIS
13   PROGLYASPPHEGLYALAASPALAGLNGLY
14   ALAMETTHRLYSALALEUGLULEUPHEARG
15   ASNASPILEALAALALYSTYRLYSGLULEU
16   GLYPHEGLNGLY

Entity 2, PLM - C16 H32 O2 - 256.424 Da.

1   PLM

Entity 3, CYN - C N - 26.017 Da.

1   CYN

Samples:

sample_1: PLM0 – 0.4 mM; Mb 0.8 mM; Tris buffer 30 mM; EDTA 1 mM; CN 0.8 mM; H2O 95%; D2O 5%

sample_conditions_1: pH: 7.4; pressure: 1 atm; temperature: 308 K

Experiments:

NameSampleSample stateSample conditions
1H NMRsample_1isotropicsample_conditions_1

Software:

SigmaPlot, Systat Software, Inc., Point Richmond, CA - statistical analysis

NMR spectrometers:

  • Bruker Avance 500 MHz

Related Database Links:

BMRB 1028 1030 1031 1032 1033 1202 1203 1205 17116 2935 2936
PDB
REF NP_001157488 XP_008542050
SP P68082 P68083
AlphaFold P68082 P68083