BMRB Entry 16951

Title:
The Structure of RNA Internal Loops with Tandem AG Pairs: 5'GAGC/3'CGAG
Deposition date:
2010-05-25
Original release date:
2010-07-02
Authors:
Hammond, Nicholas; Kennedy, Scott; Turner, Douglas
Citation:

Citation: Hammond, Nicholas; Tolbert, Blanton; Kierzek, Ryszard; Turner, Douglas; Kennedy, Scott. "RNA internal loops with tandem AG pairs: the structure of the 5'GAGU/3'UGAG loop can be dramatically different from others, including 5'AAGU/3'UGAA."  Biochemistry 49, 5817-5827 (2010).
PubMed: 20481618

Assembly members:

Assembly members:
RNA_(5'-R(*GP*AP*CP*GP*AP*GP*CP*GP*UP*CP*A)-3'), polymer, 11 residues, 3530.203 Da.

Natural source:

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: not available not available

Experimental source:

Experimental source:   Production method: obtained from a vendor

Entity Sequences (FASTA):

Entity Sequences (FASTA):
RNA_(5'-R(*GP*AP*CP*GP*AP*GP*CP*GP*UP*CP*A)-3'): GACGAGCGUCA

Data sets:
Data typeCount
13C chemical shifts50
1H chemical shifts107
31P chemical shifts10

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1RNA (5'-R(*GP*AP*CP*GP*AP*GP*CP*GP*UP*CP*A)-3')_11
2RNA (5'-R(*GP*AP*CP*GP*AP*GP*CP*GP*UP*CP*A)-3')_21

Entities:

Entity 1, RNA (5'-R(*GP*AP*CP*GP*AP*GP*CP*GP*UP*CP*A)-3')_1 11 residues - 3530.203 Da.

1   GACGAGCGUC
2   A