BMRB Entry 16883

Name: the N-terminal domain of human H-REV107
Published: 2010-06-15

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16883

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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

the N-terminal domain of human H-REV107

Deposition date:

2010-04-20

Original release date:

2010-06-15

Authors:

Ren, Xiaobai; Xia, Bin

Citation:

Citation: Ren, Xiaobai; Lin, Jian; Jin, Changwen; Xia, Bin. "1H, 13C and 15N resonance assignments of human H-REV107 N-terminal domain." Biomol. NMR Assignments 4, 175-178 (2010).
PubMed: 20526701

Assembly members:

Assembly members:
H-REV107N, polymer, 125 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET24a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
H-REV107N: MRAPIPEPKPGDLIEIFRPF YRHWAIYVGDGYVVHLAPPS EVAGAGAASVMSALTDKAIV KKELLYDVAGSDKYQVNNKH DDKYSPLPCSKIIQRAEELV GQEVLYKLTSENCEHFVNEL RYGVA

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	518
15N chemical shifts	116
1H chemical shifts	800

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	H-REV107N	1

Entities:

Entity 1, H-REV107N 125 residues - Formula weight is not available

1

MET

ARG

ALA

PRO

ILE

PRO

GLU

PRO

LYS

PRO

2

GLY

ASP

LEU

ILE

GLU

ILE

PHE

ARG

PRO

PHE

3

TYR

ARG

HIS

TRP

ALA

ILE

TYR

VAL

GLY

ASP

4

GLY

TYR

VAL

HIS

LEU

ALA

PRO

SER

5

GLU

VAL

ALA

GLY

ALA

GLY

ALA

SER

VAL

6

MET

SER

ALA

LEU

THR

ASP

LYS

ALA

ILE

VAL

7

LYS

GLU

LEU

TYR

ASP

VAL

ALA

GLY

8

SER

ASP

LYS

TYR

GLN

VAL

ASN

LYS

HIS

9

ASP

LYS

TYR

SER

PRO

LEU

PRO

CYS

SER

10

LYS

ILE

GLN

ARG

ALA

GLU

LEU

VAL

11

GLY

GLN

GLU

VAL

LEU

TYR

LYS

LEU

THR

SER

12

GLU

ASN

CYS

GLU

HIS

PHE

VAL

ASN

GLU

LEU

13

ARG

TYR

GLY

VAL

ALA

Samples:

sample_1: H-REV107N, [U-13C; U-15N], 1 mM; sodium phosphate 30 mM; sodium chloride 30 mM; DTT 10 mM; H2O 90%; D2O 10%; sodium azide 0.05 w/v; DSS 0.02 w/v

sample_conditions_1: ionic strength: 60 mM; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_1	isotropic	sample_conditions_1
3D (H)CCH-COSY	sample_1	isotropic	sample_conditions_1
3D HCCH-COSY	sample_1	isotropic	sample_conditions_1

Software:

NMRPipe v2.1, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMRView v5, Johnson, One Moon Scientific - data analysis

xwinnmr v3.5, Bruker Biospin - collection

TOPSPIN v2.1, Bruker Biospin - collection

NMR spectrometers:

Bruker Avance 500 MHz
Bruker Avance 600 MHz

PDB	2KYT 4DOT 4FA0
DBJ	BAB08108 BAG35901 BAH08749 BAI46481
EMBL	CAA63423 CAH92805
GB	AAH01387 AAI03808 AAI03809 AAL26892 ABM83494
REF	NP_001121675 NP_001128980 NP_001244356 NP_009000 XP_002833696
SP	P53816 Q5R611
AlphaFold	P53816 Q5R611