BMRB Entry 16838

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16838

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Title:
Backbone 1H, 13C, and 15N chemical shift assignments of the extracellular domain of tissue factor
Deposition date:
2010-04-06
Original release date:
2010-06-15
Authors:
Boettcher, John; Clay, Mary; LaHood, Benjamin; Morrissey, James; Rienstra, Chad
Citation:

Citation: Boettcher, John; Clay, Mary; LaHood, Benjamin; Morrissey, James; Rienstra, Chad. "Backbone 1H, 13C and 15N resonance assignments of the extracellular domain of tissue factor."  Biomol. NMR Assignments 4, 183-185 (2010).
PubMed: 20526825

Assembly members:

Assembly members:
soluble_tissue_factor, polymer, 229 residues, Formula weight is not available

Natural source:

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli   Vector: pJH677

Entity Sequences (FASTA):

Entity Sequences (FASTA):
soluble_tissue_factor: ATTNTVAAYNLTWKSTNFKT ILEWEPKPVNQVYTVQISTK SGDWKSKCFYTTDTECDLTD EIVKDVKQTYLARVFSYPAG NVESTGSAGEPLYENSPEFT PYLETNLGQPTIQSFEQVGT KVNVTVEDERTLVRRNNTFL SLRDVFGKDLIYTLYYWKSS SSGKKTAKTNTNEFLIDVDK GENYCFSVQAVIPSRTVNRK STDSPVECMGQEKGEFREGG AAGHHHHHH

Data sets:
Data typeCount
13C chemical shifts543
15N chemical shifts204
1H chemical shifts204

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Assembly:

Entity Assembly IDEntity NameEntity ID
1soluble tissue factor1

Entities:

Entity 1, soluble tissue factor 229 residues - Formula weight is not available

1   ALATHRTHRASNTHRVALALAALATYRASN
2   LEUTHRTRPLYSSERTHRASNPHELYSTHR
3   ILELEUGLUTRPGLUPROLYSPROVALASN
4   GLNVALTYRTHRVALGLNILESERTHRLYS
5   SERGLYASPTRPLYSSERLYSCYSPHETYR
6   THRTHRASPTHRGLUCYSASPLEUTHRASP
7   GLUILEVALLYSASPVALLYSGLNTHRTYR
8   LEUALAARGVALPHESERTYRPROALAGLY
9   ASNVALGLUSERTHRGLYSERALAGLYGLU
10   PROLEUTYRGLUASNSERPROGLUPHETHR
11   PROTYRLEUGLUTHRASNLEUGLYGLNPRO
12   THRILEGLNSERPHEGLUGLNVALGLYTHR
13   LYSVALASNVALTHRVALGLUASPGLUARG
14   THRLEUVALARGARGASNASNTHRPHELEU
15   SERLEUARGASPVALPHEGLYLYSASPLEU
16   ILETYRTHRLEUTYRTYRTRPLYSSERSER
17   SERSERGLYLYSLYSTHRALALYSTHRASN
18   THRASNGLUPHELEUILEASPVALASPLYS
19   GLYGLUASNTYRCYSPHESERVALGLNALA
20   VALILEPROSERARGTHRVALASNARGLYS
21   SERTHRASPSERPROVALGLUCYSMETGLY
22   GLNGLULYSGLYGLUPHEARGGLUGLYGLY
23   ALAALAGLYHISHISHISHISHISHIS

Related Database Links:

PDB 1AHW 1BOY 1DAN 1FAK 1J9C 1JPS 1O5D 1TFH 1UJ3 1W0Y 1W2K 1WQV 1WSS 1WTG 1WUN 1WV7 1Z6J 2A2Q 2AEI 2AER 2B7D 2B8O 2EC9 2F9B 2FIR 2FLB 2FLR 2PUQ 2ZP0 2ZWL 2ZZU 3ELA 3TH2 3TH3 3TH4 4IBL
DBJ BAG35522 BAI46540
EMBL CAG46591
GB AAA36734 AAA61150 AAA61151 AAA61152 AAH11029
REF NP_001171567 NP_001984 XP_001156332 XP_001156450 XP_003808492
SP P13726
AlphaFold P13726

Download HSQC peak lists in one of the following formats:
CSV: Backbone or all simulated peaks
SPARKY: Backbone or all simulated peaks