BMRB Entry 16674

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PDB ID: 2ksu
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR16674
MolProbity Validation Chart

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Title:
NMR Solution structures of fully reduced cytochrome c3 from Desulfovibrio desulfuricans ATCC 2777
Deposition date:
2010-01-13
Original release date:
2010-10-18
Authors:
Turner, David; Paixao, Vitor
Citation:

Citation: Paixao, Vitor; Vis, Hans; Turner, David. "Redox linked conformational changes in cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774."  Biochemistry 49, 9620-9629 (2010).
PubMed: 20886839

Assembly members:

Assembly members:
cytochrome_c3, polymer, 107 residues, 11383.284 Da.
HEM, non-polymer, 616.487 Da.

Natural source:

Natural source:   Common Name: Desulfovibrio desulfuricans   Taxonomy ID: 876   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Desulfovibrio desulfuricans

Experimental source:

Experimental source:   Production method: purified from the natural source   Host organism: Desulfovibrio desulfuricans   Vector: na

Entity Sequences (FASTA):

Entity Sequences (FASTA):
cytochrome_c3: APAVPDKPVEVKGSQKTVMF PHAPHEKVECVTCHHLVDGK ESYAKCGSSGCHDDLTAKKG EKSLYYVVHARGELKHTSCL ACHSKVVAEKPELKKDLTGC AKSKCHP

Data sets:
Data typeCount
1H chemical shifts634

Additional metadata:

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  • Samples and Experiments
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Assembly:

Entity Assembly IDEntity NameEntity ID
1cytochrome c31
2HEM 12
3HEM 22
4HEM 32
5HEM 42

Entities:

Entity 1, cytochrome c3 107 residues - 11383.284 Da.

1   ALAPROALAVALPROASPLYSPROVALGLU
2   VALLYSGLYSERGLNLYSTHRVALMETPHE
3   PROHISALAPROHISGLULYSVALGLUCYS
4   VALTHRCYSHISHISLEUVALASPGLYLYS
5   GLUSERTYRALALYSCYSGLYSERSERGLY
6   CYSHISASPASPLEUTHRALALYSLYSGLY
7   GLULYSSERLEUTYRTYRVALVALHISALA
8   ARGGLYGLULEULYSHISTHRSERCYSLEU
9   ALACYSHISSERLYSVALVALALAGLULYS
10   PROGLULEULYSLYSASPLEUTHRGLYCYS
11   ALALYSSERLYSCYSHISPRO

Entity 2, HEM 1 - C34 H32 Fe N4 O4 - 616.487 Da.

1   HEM

Related Database Links:

BMRB 16443
PDB 1GM4 1GMB 1UP9 1UPD 2KMY 2KSU 3CYR
GB AAF43894 ACL49909
REF WP_012625633