BMRB Entry 16459

Name: Solution Structure of the Ran-binding Domain 2 of RanBP and its Interaction with the C Terminus of Ran
Published: 2010-03-08

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16459

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

Solution Structure of the Ran-binding Domain 2 of RanBP and its Interaction with the C Terminus of Ran

Deposition date:

2009-08-19

Original release date:

2010-03-08

Authors:

Geyer, J.; Doker, Rolf; Kremer, Werner; Zhao, Xiaodong; Kuhlmann, Jurgen; Kalbitzer, Hans

Citation:

Citation: Geyer, J.; Doker, Rolf; Kremer, Werner; Zhao, Xiaodong; Kuhlmann, Jurgen; Kalbitzer, Hans. "Solution Structure of the Ran-binding Domain 2 of RanBP2 and its Interaction with the C Terminus of Ran" J. Mol. Biol. 348, 711-725 (2005).
PubMed: 15826666

Assembly members:

Assembly members:
RanBD2(delta)N, polymer, 130 residues, Formula weight is not available
peptide_2, polymer, 28 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source:

Experimental source: Production method: chemical synthesis Vector: na

Entity Sequences (FASTA):

Entity Sequences (FASTA):
RanBD2(delta)N: GSGEEDEKVLYSQRVKLFRF DAEVSQWKERGLGNLKILKN EVNGKLRMLMRREQVLKVCA NHWITTTMNLKPLSGSDRAW MWLASDFSDGDAKLEQLAAK FKTPELAEEFKQKFEECQRL LLDIPLQTPK
peptide_2: MDPALAAQYEHDLEVAQTTA LPDEDDDL

Data sets:

binding_constants

Data type	Count
binding constants	2

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	RanBD2(delta)N	1
2	Ran C	2

Entities:

Entity 1, RanBD2(delta)N 130 residues - Formula weight is not available

1	GLY	SER	GLY	GLU	GLU	ASP	GLU	LYS	VAL	LEU
2	TYR	SER	GLN	ARG	VAL	LYS	LEU	PHE	ARG	PHE
3	ASP	ALA	GLU	VAL	SER	GLN	TRP	LYS	GLU	ARG
4	GLY	LEU	GLY	ASN	LEU	LYS	ILE	LEU	LYS	ASN
5	GLU	VAL	ASN	GLY	LYS	LEU	ARG	MET	LEU	MET
6	ARG	ARG	GLU	GLN	VAL	LEU	LYS	VAL	CYS	ALA
7	ASN	HIS	TRP	ILE	THR	THR	THR	MET	ASN	LEU
8	LYS	PRO	LEU	SER	GLY	SER	ASP	ARG	ALA	TRP
9	MET	TRP	LEU	ALA	SER	ASP	PHE	SER	ASP	GLY
10	ASP	ALA	LYS	LEU	GLU	GLN	LEU	ALA	ALA	LYS
11	PHE	LYS	THR	PRO	GLU	LEU	ALA	GLU	GLU	PHE
12	LYS	GLN	LYS	PHE	GLU	GLU	CYS	GLN	ARG	LEU
13	LEU	LEU	ASP	ILE	PRO	LEU	GLN	THR	PRO	LYS

Entity 2, Ran C 28 residues - Formula weight is not available

1

MET

ASP

PRO

ALA

LEU

ALA

GLN

TYR

GLU

2

HIS

ASP

LEU

GLU

VAL

ALA

GLN

THR

ALA

3

LEU

PRO

ASP

GLU

ASP

LEU

Name	Sample	Sample state	Sample conditions
2D 1H-15N TROSY	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1

PDB	1XKE 1A2K 1BYU 1I2M 1IBR 1K5D 1K5G 1QBK 1QG2 1QG4 1RRP 2MMC 2MMG 3A6P 3CH5 3EA5 3GJ0 3GJ3 3GJ4 3GJ5 3GJ6 3GJ7 3GJ8 3GJX 3RAN 4C0Q 4GMX 4GPT 4HAT 4HAU 4HAV 4HAW 4HAX 4HAY 4HAZ 4HB0 4HB2 4HB3 4HB4 4OL0
BMRB	19852 19854
DBJ	BAB27034 BAB27105 BAB93486 BAC36040 BAC40068
EMBL	CAA77980 CAG29343 CAH92646 CAH93110 CAI29709
GB	AAA36546 AAA64247 AAB20486 AAB24940 AAB26214
REF	NP_001029877 NP_001126549 NP_001129282 NP_001155348 NP_001181913
SP	P62825 P62826 P62827 P62828 Q3T054
TPG	DAA20885
AlphaFold	P62825 P62826 P62827 P62828 Q3T054

BMRB Entry 16459

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	SER	GLY	GLU	GLU	ASP	GLU	LYS	VAL	LEU
2	TYR	SER	GLN	ARG	VAL	LYS	LEU	PHE	ARG	PHE
3	ASP	ALA	GLU	VAL	SER	GLN	TRP	LYS	GLU	ARG
4	GLY	LEU	GLY	ASN	LEU	LYS	ILE	LEU	LYS	ASN
5	GLU	VAL	ASN	GLY	LYS	LEU	ARG	MET	LEU	MET
6	ARG	ARG	GLU	GLN	VAL	LEU	LYS	VAL	CYS	ALA
7	ASN	HIS	TRP	ILE	THR	THR	THR	MET	ASN	LEU
8	LYS	PRO	LEU	SER	GLY	SER	ASP	ARG	ALA	TRP
9	MET	TRP	LEU	ALA	SER	ASP	PHE	SER	ASP	GLY
10	ASP	ALA	LYS	LEU	GLU	GLN	LEU	ALA	ALA	LYS
11	PHE	LYS	THR	PRO	GLU	LEU	ALA	GLU	GLU	PHE
12	LYS	GLN	LYS	PHE	GLU	GLU	CYS	GLN	ARG	LEU
13	LEU	LEU	ASP	ILE	PRO	LEU	GLN	THR	PRO	LYS

1	GLY	SER	GLY	GLU	GLU	ASP	GLU	LYS	VAL	LEU
2	TYR	SER	GLN	ARG	VAL	LYS	LEU	PHE	ARG	PHE
3	ASP	ALA	GLU	VAL	SER	GLN	TRP	LYS	GLU	ARG
4	GLY	LEU	GLY	ASN	LEU	LYS	ILE	LEU	LYS	ASN
5	GLU	VAL	ASN	GLY	LYS	LEU	ARG	MET	LEU	MET
6	ARG	ARG	GLU	GLN	VAL	LEU	LYS	VAL	CYS	ALA
7	ASN	HIS	TRP	ILE	THR	THR	THR	MET	ASN	LEU
8	LYS	PRO	LEU	SER	GLY	SER	ASP	ARG	ALA	TRP
9	MET	TRP	LEU	ALA	SER	ASP	PHE	SER	ASP	GLY
10	ASP	ALA	LYS	LEU	GLU	GLN	LEU	ALA	ALA	LYS
11	PHE	LYS	THR	PRO	GLU	LEU	ALA	GLU	GLU	PHE
12	LYS	GLN	LYS	PHE	GLU	GLU	CYS	GLN	ARG	LEU
13	LEU	LEU	ASP	ILE	PRO	LEU	GLN	THR	PRO	LYS

1	GLY	SER	GLY	GLU	GLU	ASP	GLU	LYS	VAL	LEU
2	TYR	SER	GLN	ARG	VAL	LYS	LEU	PHE	ARG	PHE
3	ASP	ALA	GLU	VAL	SER	GLN	TRP	LYS	GLU	ARG
4	GLY	LEU	GLY	ASN	LEU	LYS	ILE	LEU	LYS	ASN
5	GLU	VAL	ASN	GLY	LYS	LEU	ARG	MET	LEU	MET
6	ARG	ARG	GLU	GLN	VAL	LEU	LYS	VAL	CYS	ALA
7	ASN	HIS	TRP	ILE	THR	THR	THR	MET	ASN	LEU
8	LYS	PRO	LEU	SER	GLY	SER	ASP	ARG	ALA	TRP
9	MET	TRP	LEU	ALA	SER	ASP	PHE	SER	ASP	GLY
10	ASP	ALA	LYS	LEU	GLU	GLN	LEU	ALA	ALA	LYS
11	PHE	LYS	THR	PRO	GLU	LEU	ALA	GLU	GLU	PHE
12	LYS	GLN	LYS	PHE	GLU	GLU	CYS	GLN	ARG	LEU
13	LEU	LEU	ASP	ILE	PRO	LEU	GLN	THR	PRO	LYS