BMRB Entry 16426

Name: NMR-derived structure of residues 29-138 of murine Ets-1, containing the PNT domain, along with phosphorylated Thr38 and Ser41
Published: 2009-12-18

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PDB ID: 2kmd
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16426
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title:

NMR-derived structure of residues 29-138 of murine Ets-1, containing the PNT domain, along with phosphorylated Thr38 and Ser41

Deposition date:

2009-07-27

Original release date:

2009-12-18

Authors:

Kang, Hyun-Seo; Lee, Gregory; Nelson, Mary; Graves, Barbara; Blaszczak, Adam; McIntosh, Lawrence

Citation:

Citation: McIntosh, Lawrence; Kang, Hyun-Seo; Okon, Mark; Nelson, Mary; Graves, Barbara; Brutscher, Bernhard. "Detection and assignment of phosphoserine and phosphothreonine residues by (13)C- (31)P spin-echo difference NMR spectroscopy." J. Biomol. NMR 43, 31-37 (2009).
PubMed: 19002654

Assembly members:

Assembly members:
murine Ets-1, polymer, 113 residues, Formula weight is not available

Natural source:

Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source:

Experimental source: Production method: recombinant technology Host organism: Escherichia coli Vector: pET28a

Entity Sequences (FASTA):

Entity Sequences (FASTA):
murine Ets-1: GSHMECADVPLLXPSXKEMM SQALKATFSGFTKEQQRLGI PKDPRQWTETHVRDWVMWAV NEFSLKGVDFQKFCMSGAAL CALGKECFLELAPDFVGDIL WEHLEILQKEDVK

Data sets:

assigned_chemical_shifts
- 2P_ETS1PNT_CSHIFT
heteronucl_NOEs
- heteronuclear_noe_list_1
heteronucl_T1_relaxation
- heteronuclear_T1_list_1
heteronucl_T2_relaxation
- heteronuclear_T2_list_1

Data type	Count
13C chemical shifts	503
15N chemical shifts	119
1H chemical shifts	797
heteronuclear NOE values	103
T1 relaxation values	103
T2 relaxation values	103

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	murine Ets-1	1

Entities:

Entity 1, murine Ets-1 113 residues - Formula weight is not available

1

GLY

SER

HIS

MET

GLU

CYS

ALA

ASP

VAL

PRO

2

LEU

TPO

PRO

SER

SEP

LYS

GLU

MET

3

SER

GLN

ALA

LEU

LYS

ALA

THR

PHE

SER

GLY

4

PHE

THR

LYS

GLU

GLN

ARG

LEU

GLY

ILE

5

PRO

LYS

ASP

PRO

ARG

GLN

TRP

THR

GLU

THR

6

HIS

VAL

ARG

ASP

TRP

VAL

MET

TRP

ALA

VAL

7

ASN

GLU

PHE

SER

LEU

LYS

GLY

VAL

ASP

PHE

8

GLN

LYS

PHE

CYS

MET

SER

GLY

ALA

LEU

9

CYS

ALA

LEU

GLY

LYS

GLU

CYS

PHE

LEU

GLU

10

LEU

ALA

PRO

ASP

PHE

VAL

GLY

ASP

ILE

LEU

11

TRP

GLU

HIS

LEU

GLU

ILE

LEU

GLN

LYS

GLU

12

ASP

VAL

LYS

Samples:

sample_1: 2P-ETS1PNT, [U-100% 13C; U-100% 15N], 1 mM; H2O 90%; D2O 10%

sample_conditions_1: ionic strength: 20 mM; pH: 6.5; pressure: 1 atm; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
IPAP	sample_1	isotropic	sample_conditions_1
CLEANEX	sample_1	isotropic	sample_conditions_1
T1_T2_HNNOE	sample_1	isotropic	sample_conditions_1
HNCOCA_HACA	sample_1	isotropic	sample_conditions_1

Software:

CYANA, Guntert, Mumenthaler and Wuthrich - structure solution

SCULPTOR, (SCULPTOR)-Martin Blackledge - refinement

SPARKY, Goddard - chemical shift assignment

NMRDraw, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

Molmol, Koradi, Billeter and Wuthrich - data analysis

ProcheckNMR, Laskowski and MacArthur - data analysis

VNMR, Varian - collection

TALOS, Cornilescu, Delaglio and Bax - data analysis

NMR spectrometers:

Varian INOVA 600 MHz

BMRB	4205
PDB	2JV3 2KMD
DBJ	BAE40197
EMBL	CAA37904
GB	AAA21093 AAA63299 AAH10588 AAH13089 AAI01928
REF	NP_001033731 NP_035938 NP_036687 XP_003500343 XP_005347065
SP	P27577 P41156
AlphaFold	P27577 P41156